merging Jessie's mort age parameters #8
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[Set of changes to follow with size- and age-dependent mortality modelled as increases in mortality rate with cohort size/age. Here just adding the parameters for these functions to the default param file. There is a rate of change and inflection point for size and age. Cohort age fusion parameter is also included - in age dependent mortality we track cohort age - cohorts cannot be fused if they are too different in age. ] Fixes: [NGT-ED Github issue #] User interface changes?: [Yes - users will have to specify these parameters] Code review: [Names] Test suite: [suite name, machine, compilers] Test baseline: Test namelist changes: Test answer changes: [bit for bit, roundoff, climate changing] Test summary: No testing.
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…erge_July_2019-deconflict Deconflicting PR 554
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merged master and reconciled whitespace
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temporarily revert the c starvation parameter file flag
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Size and age-dependent mortality functions each have two params -
a rate and an inflection point. These are named mort-ip-senescence and
mort-r-senescence with the addition of 'age' for age-dependent mortality.
Cohort age has to be tracked - so history cohort age bins are defined.
Cohorts cannot be fused if similar ages - so there is a cohort age fusion
tolerance parameter.