GitHub - rgejman/biotools: Simple scripts for doing various small calculations I find myself doing frequently

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Simple scripts for doing various small calculations I find myself doing frequently

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Name		Name	Last commit message	Last commit date
Latest commit History 17 Commits
README		README
complement.rb		complement.rb
concentration_to_molarity.rb		concentration_to_molarity.rb
extract_from_maf.rb		extract_from_maf.rb
revcom.rb		revcom.rb
string_extensions.rb		string_extensions.rb

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Some simple scripts for bioinformatics and wet bench work. These are scripts written purely for my convenience.

1. complement.rb => Returns the complement of an RNA/DNA sequence input.
2. revcom.rb => Returns the reverse complement of an RNA/DNA sequence input.
3. concentration_to_molarity.rb => Converts concentrations of the form "xg/xl" into molarity given a nucleic acid length. This is useful because nanodrops typically return concentrations in mass/volume whereas the calculations for reactions are more easily done in terms of molarity.

Some of these scripts require ruby-units: gem install ruby-units