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netSGCCA #72

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Functions to perform netSGCCA

vguillemot and others added 3 commits May 12, 2023 10:09
generic_methods() returns methods for which only the gcca function is set and all other parameters are free
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codecov-commenter commented May 12, 2023

Codecov Report

Merging #72 (2e960a6) into main (8bdc412) will decrease coverage by 3.27%.
The diff coverage is 18.62%.

❗ Current head 2e960a6 differs from pull request most recent head 15a4985. Consider uploading reports for the commit 15a4985 to get more accurate results

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@@            Coverage Diff             @@
##             main      #72      +/-   ##
==========================================
- Coverage   94.61%   91.34%   -3.27%     
==========================================
  Files          78       81       +3     
  Lines        3267     3397     +130     
==========================================
+ Hits         3091     3103      +12     
- Misses        176      294     +118     
Impacted Files Coverage Δ
R/netsgcca.R 0.00% <0.00%> (ø)
R/netsgcca_update.R 0.00% <0.00%> (ø)
R/netsgccak.R 0.00% <0.00%> (ø)
R/sgcca.R 83.72% <ø> (-0.73%) ⬇️
R/format_output.R 100.00% <100.00%> (ø)
R/get_rgcca_args.R 95.16% <100.00%> (+0.16%) ⬆️
R/methods.R 100.00% <100.00%> (ø)
R/rgcca.R 89.74% <100.00%> (+0.26%) ⬆️
R/select_analysis.R 100.00% <100.00%> (ø)

GFabien and others added 12 commits May 12, 2023 17:25
Only the update differs between sgcca and netsgcca so init and postprocess functions can be shared
Merge branch 'main' of github.com:rgcca-factory/RGCCA into rgcca-factory-main

# Conflicts:
#	R/rgcca.R
#	R/select_analysis.R
#	R/sgcca.R
Merge branch 'rgcca-factory-main'
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4 participants