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adding LCS to the references
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replikation authored Mar 14, 2022
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# 5. Literature / References to cite
For citing etc. check out these programs used for poreCov:
If you are using poreCov please also check the used software to cite in your work:
* [artic protocol](https://artic.network/ncov-2019/ncov2019-bioinformatics-sop.html)
* [kraken2](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1891-0)
* [krona](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-12-385)
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* [pangolin](https://github.com/hCoV-2019/pangolin)
* [president](https://gitlab.com/RKIBioinformaticsPipelines/president)
* [CoVarPlot](https://github.com/Psy-Fer/CoVarPlot)
* [LCS](https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btac047/42357424/btac047.pdf)

# 6. Troubleshooting
* Collection of some helpful infos
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