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Fix UMAP sparse input crash #5494

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@viclafargue viclafargue commented Jul 7, 2023

Answers #4984

@viclafargue viclafargue requested a review from a team as a code owner July 7, 2023 12:50
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Just one small request

size_t requirements = factor * sizeof(float) * index_batch_size * query_batch_size;
if (requirements > free_mem){
index_batch_size = free_mem / (query_batch_size * factor * sizeof(float));
}
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Fix looks good to me, can you just add a description of the fix to the PR description and fix the style issues?

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Sorry guys, this still isn't quite right.

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@cjnolet, this is an older comment regarding the previous version. The current version should make use of the workspace_resource_factory to create a limiting_memory_resource with the default amount (total_size / 2 ?) and adjust the index batch size according to available memory. There may totally be things I missed, but could you give more precision to what is required here?

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@viclafargue viclafargue Nov 1, 2023

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I updated the code slightly. But, since it's a RAFT call, the limiting_memory_resource cannot be used directly. The only thing that is doable is to update the handle, so that it has a resource factory that will in time be used to produce a workspace within the RAFT sparse kNN code. We can produce an estimate of the memory that will be available on the cuML side by calling resource::get_workspace_free_bytes on the handle or get_allocation_limit on the LMR. But, that's about it, isn't it?

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@achirkin can you offer suggestions here? The main goal is to emable smart batching without relying on a query to get the free memory from the GPU (which is not acceptable practice). We started using the limiting_memory_resource_adapter so that we could do this while allowing the user to control this.

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I'm trying to understand the context here. In isolation, this change sets the batch size based on the available memory. If the raft::sparse::selection::brute_force_knn properly uses the workspace memory resource (which I hope it does but cannot check on my phone atm), then the solution looks good to me. Indeed, the workspace resource is always a limiting memory resource (the type is erased) and resource::get_workspace_free_bytes is a correct way to gets its remaining limit.

But I fail to see the connection to the linked issue. There, an invalid memory access error is reported, as suggested, likely due to integer overflow. If the workspace size is larger than 4gb, that still could be an issue, right?

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Thanks for taking a look @achirkin. The changes in rapidsai/raft#1640 in addition to these changes should solve the issue. However, to allow any batch size to be used, it would be necessary to apply modifications to ensure that the integer values of csr_batcher_t and distances_config_t are also stored on 64 bits in order to guarantee that no operation would be made on 32 bits. This was much a more involved task, this is why I left it for later.

@@ -101,6 +101,16 @@ inline void launcher(const raft::handle_t& handle,
const ML::UMAPParams* params,
cudaStream_t stream)
{
size_t free_mem, total_mem;
cudaMemGetInfo(&free_mem, &total_mem);
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@cjnolet cjnolet Jul 11, 2023

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This is, unfortunately, not a reliable way to query and compute the memory available for batching. It also won't work well with rmm pools.

The challenge here is that the total memory space can quickly become very fragmented, which prevents the reporter free memory from being allocated in a single chunk. Further, if 90% of the memory is allocated to a pool, this is going to report almost no memory available even though the pool could be largely empty.

A better way to approach this problem will be to use the limiting memory resource once its available. This new resource will be applied on top of the workspace resource and will provide a safe and consistent mechanism for us to handle implicit batching on the users behalf in a way that also plays nicely with RMM pools.

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@cjnolet, the current approach of this PR was to first compute the memory requirements, and then adjust the index batch size if necessary. I understand that getting the free available memory directly from CUDA API is not a good solution as a RMM pool that could/should be used might have already been pre-allocated.

The limiting_resource_adaptor might provide a way to limit downstream memory usage of an upstream device_memory_resource. However, I do not see how this will help solving this issue. The issue is that a complete sparse operation consumes too much memory at once and should be split in multiple operations through batching instead.

Could you give more precision as to how it will provide a safe and consistent mechanism for us to handle implicit batching on the users behalf in a way that also plays nicely with RMM pools?

@viclafargue viclafargue requested review from a team as code owners October 30, 2023 14:05
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@github-actions github-actions bot added conda conda issue Cython / Python Cython or Python issue CMake ci labels Oct 30, 2023
@viclafargue viclafargue force-pushed the fix-umap-sparse-input branch from 082ec5a to 6e93b15 Compare October 30, 2023 14:20
@viclafargue viclafargue changed the base branch from branch-23.08 to branch-23.12 October 30, 2023 14:20
@github-actions github-actions bot removed conda conda issue Cython / Python Cython or Python issue CMake ci labels Oct 30, 2023
@viclafargue viclafargue requested a review from cjnolet October 31, 2023 13:39
@ajschmidt8 ajschmidt8 removed the request for review from a team December 13, 2023 19:51
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