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Added streams to JSON reader and writer api #14313

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Oct 30, 2023
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1 change: 0 additions & 1 deletion cpp/include/cudf/io/detail/json.hpp
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,6 @@
#pragma once

#include <cudf/io/json.hpp>
#include <cudf/utilities/default_stream.hpp>

#include <rmm/cuda_stream_view.hpp>

Expand Down
4 changes: 4 additions & 0 deletions cpp/include/cudf/io/json.hpp
Original file line number Diff line number Diff line change
Expand Up @@ -512,13 +512,15 @@ class json_reader_options_builder {
* @endcode
*
* @param options Settings for controlling reading behavior
* @param stream CUDA stream used for device memory operations and kernel launches
* @param mr Device memory resource used to allocate device memory of the table in the returned
* table_with_metadata.
*
* @return The set of columns along with metadata
*/
table_with_metadata read_json(
json_reader_options options,
rmm::cuda_stream_view stream = cudf::get_default_stream(),
rmm::mr::device_memory_resource* mr = rmm::mr::get_current_device_resource());

/** @} */ // end of group
Expand Down Expand Up @@ -861,9 +863,11 @@ class json_writer_options_builder {
* @endcode
*
* @param options Settings for controlling writing behavior
* @param stream CUDA stream used for device memory operations and kernel launches
* @param mr Device memory resource to use for device memory allocation
*/
void write_json(json_writer_options const& options,
rmm::cuda_stream_view stream = cudf::get_default_stream(),
rmm::mr::device_memory_resource* mr = rmm::mr::get_current_device_resource());

/** @} */ // end of group
Expand Down
12 changes: 8 additions & 4 deletions cpp/src/io/functions.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -200,7 +200,9 @@ compression_type infer_compression_type(compression_type compression, source_inf
return compression_type::NONE;
}

table_with_metadata read_json(json_reader_options options, rmm::mr::device_memory_resource* mr)
table_with_metadata read_json(json_reader_options options,
rmm::cuda_stream_view stream,
rmm::mr::device_memory_resource* mr)
{
CUDF_FUNC_RANGE();

Expand All @@ -210,10 +212,12 @@ table_with_metadata read_json(json_reader_options options, rmm::mr::device_memor
options.get_byte_range_offset(),
options.get_byte_range_size_with_padding());

return json::detail::read_json(datasources, options, cudf::get_default_stream(), mr);
return json::detail::read_json(datasources, options, stream, mr);
}

void write_json(json_writer_options const& options, rmm::mr::device_memory_resource* mr)
void write_json(json_writer_options const& options,
rmm::cuda_stream_view stream,
rmm::mr::device_memory_resource* mr)
{
auto sinks = make_datasinks(options.get_sink());
CUDF_EXPECTS(sinks.size() == 1, "Multiple sinks not supported for JSON writing");
Expand All @@ -222,7 +226,7 @@ void write_json(json_writer_options const& options, rmm::mr::device_memory_resou
sinks[0].get(),
options.get_table(),
options,
cudf::get_default_stream(),
stream,
mr);
}

Expand Down
1 change: 0 additions & 1 deletion cpp/src/io/json/nested_json.hpp
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,6 @@
#include <cudf/io/types.hpp>
#include <cudf/types.hpp>
#include <cudf/utilities/bit.hpp>
#include <cudf/utilities/default_stream.hpp>
#include <cudf/utilities/error.hpp>

#include <map>
Expand Down
19 changes: 19 additions & 0 deletions cpp/src/io/json/write_json.cu
Original file line number Diff line number Diff line change
Expand Up @@ -504,6 +504,25 @@ struct column_to_strings_fn {
{
}

column_to_strings_fn(column_to_strings_fn const& other)
: options_{other.options_},
stream_{other.stream_},
mr_{other.mr_},
narep(other.narep, other.stream_),
struct_value_separator(other.struct_value_separator, other.stream_),
struct_row_begin_wrap(other.struct_row_begin_wrap, other.stream_),
struct_row_end_wrap(other.struct_row_end_wrap, other.stream_),
list_value_separator(other.list_value_separator, other.stream_),
list_row_begin_wrap(other.list_row_begin_wrap, other.stream_),
list_row_end_wrap(other.list_row_end_wrap, other.stream_)
{
}
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column_to_strings_fn is not meant to be copied.
I just added the patch to fix the copy constructor from being invoked. (please apply pre-commit hooks for clang-format, after applying this patch)

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diff --git a/cpp/src/io/json/write_json.cu b/cpp/src/io/json/write_json.cu
index c98e93aec4..98b35fc943 100644
--- a/cpp/src/io/json/write_json.cu
+++ b/cpp/src/io/json/write_json.cu
@@ -633,17 +633,17 @@ struct column_to_strings_fn {
 
     auto child_string_with_null = [&]() {
       if (child_view.type().id() == type_id::STRUCT) {
-        return (*this).template operator()<cudf::struct_view>(
+        return this->template operator()<cudf::struct_view>(
           child_view,
           children_names.size() > child_index ? children_names[child_index].children
                                               : std::vector<column_name_info>{});
       } else if (child_view.type().id() == type_id::LIST) {
-        return (*this).template operator()<cudf::list_view>(child_view,
+        return this->template operator()<cudf::list_view>(child_view,
                                                             children_names.size() > child_index
                                                               ? children_names[child_index].children
                                                               : std::vector<column_name_info>{});
       } else {
-        return cudf::type_dispatcher(child_view.type(), *this, child_view);
+        return cudf::type_dispatcher<cudf::id_to_type_impl, column_to_strings_fn const&>(child_view.type(), *this, child_view);
       }
     };
     auto new_offsets = cudf::lists::detail::get_normalized_offsets(
@@ -706,17 +706,17 @@ struct column_to_strings_fn {
                      auto const& current_col = thrust::get<1>(i_current_col);
                      // Struct needs children's column names
                      if (current_col.type().id() == type_id::STRUCT) {
-                       return (*this).template operator()<cudf::struct_view>(
+                       return this->template operator()<cudf::struct_view>(
                          current_col,
                          children_names.size() > i ? children_names[i].children
                                                    : std::vector<column_name_info>{});
                      } else if (current_col.type().id() == type_id::LIST) {
-                       return (*this).template operator()<cudf::list_view>(
+                       return this->template operator()<cudf::list_view>(
                          current_col,
                          children_names.size() > i ? children_names[i].children
                                                    : std::vector<column_name_info>{});
                      } else {
-                       return cudf::type_dispatcher(current_col.type(), *this, current_col);
+                       return cudf::type_dispatcher<cudf::id_to_type_impl, column_to_strings_fn const&>(current_col.type(), *this, current_col);
                      }
                    });
 

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Suggested change
column_to_strings_fn(column_to_strings_fn const& other)
: options_{other.options_},
stream_{other.stream_},
mr_{other.mr_},
narep(other.narep, other.stream_),
struct_value_separator(other.struct_value_separator, other.stream_),
struct_row_begin_wrap(other.struct_row_begin_wrap, other.stream_),
struct_row_end_wrap(other.struct_row_end_wrap, other.stream_),
list_value_separator(other.list_value_separator, other.stream_),
list_row_begin_wrap(other.list_row_begin_wrap, other.stream_),
list_row_end_wrap(other.list_row_end_wrap, other.stream_)
{
}
column_to_strings_fn(column_to_strings_fn const& other) = delete;

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similarly other constructors and assignment operators can be deleted too.

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Thank you, @karthikeyann. The patch has been applied.

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TIL you can get the type dispatcher to take the functor by reference.
Thanks @karthikeyann!

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Very nice job on this, @karthikeyann. 👏


~column_to_strings_fn() = default;
column_to_strings_fn& operator=(column_to_strings_fn const&) = delete;
column_to_strings_fn(column_to_strings_fn&&) = default;
column_to_strings_fn& operator=(column_to_strings_fn&&) = default;

// unsupported type of column:
template <typename column_type>
std::enable_if_t<is_not_handled<column_type>(), std::unique_ptr<column>> operator()(
Expand Down
1 change: 1 addition & 0 deletions cpp/tests/CMakeLists.txt
Original file line number Diff line number Diff line change
Expand Up @@ -649,6 +649,7 @@ ConfigureTest(
ConfigureTest(STREAM_SORTING_TEST streams/sorting_test.cpp STREAM_MODE testing)
ConfigureTest(STREAM_TEXT_TEST streams/text/ngrams_test.cpp STREAM_MODE testing)
ConfigureTest(STREAM_LISTS_TEST streams/lists_test.cpp STREAM_MODE testing)
ConfigureTest(STREAM_IO_TEST streams/io/functions_test.cpp STREAM_MODE testing)

# ##################################################################################################
# Install tests ####################################################################################
Expand Down
5 changes: 4 additions & 1 deletion cpp/tests/io/json_test.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -18,6 +18,7 @@
#include <cudf_test/column_utilities.hpp>
#include <cudf_test/column_wrapper.hpp>
#include <cudf_test/cudf_gtest.hpp>
#include <cudf_test/default_stream.hpp>
#include <cudf_test/iterator_utilities.hpp>
#include <cudf_test/table_utilities.hpp>
#include <cudf_test/type_lists.hpp>
Expand Down Expand Up @@ -1422,7 +1423,9 @@ TEST_F(JsonReaderTest, JsonLongString)
.lines(true)
.na_rep("null");

cudf::io::write_json(options_builder.build(), rmm::mr::get_current_device_resource());
cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());

cudf::table_view const expected = tbl_view;
std::map<std::string, data_type> types;
Expand Down
65 changes: 46 additions & 19 deletions cpp/tests/io/json_writer.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,7 @@

#include <cudf_test/base_fixture.hpp>
#include <cudf_test/column_wrapper.hpp>
#include <cudf_test/default_stream.hpp>
#include <cudf_test/iterator_utilities.hpp>

#include <cudf/detail/iterator.cuh>
Expand Down Expand Up @@ -49,22 +50,25 @@ TEST_F(JsonWriterTest, EmptyInput)
.build();

// Empty columns in table
cudf::io::write_json(out_options, rmm::mr::get_current_device_resource());
cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource());
std::string const expected = R"([])";
EXPECT_EQ(expected, std::string(out_buffer.data(), out_buffer.size()));

// Empty columns in table - JSON Lines
out_buffer.clear();
out_options.enable_lines(true);
cudf::io::write_json(out_options, rmm::mr::get_current_device_resource());
cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource());
std::string const expected_lines = "\n";
EXPECT_EQ(expected_lines, std::string(out_buffer.data(), out_buffer.size()));

// Empty table - JSON Lines
cudf::table_view tbl_view2{};
out_options.set_table(tbl_view2);
out_buffer.clear();
cudf::io::write_json(out_options, rmm::mr::get_current_device_resource());
cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource());
EXPECT_EQ(expected_lines, std::string(out_buffer.data(), out_buffer.size()));
}

Expand All @@ -89,17 +93,22 @@ TEST_F(JsonWriterTest, ErrorCases)
.build();

// not enough column names
EXPECT_THROW(cudf::io::write_json(out_options, rmm::mr::get_current_device_resource()),
cudf::logic_error);
EXPECT_THROW(
cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource()),
cudf::logic_error);

mt.schema_info.emplace_back("int16");
out_options.set_metadata(mt);
EXPECT_NO_THROW(cudf::io::write_json(out_options, rmm::mr::get_current_device_resource()));
EXPECT_NO_THROW(cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource()));

// chunk_rows must be at least 8
out_options.set_rows_per_chunk(0);
EXPECT_THROW(cudf::io::write_json(out_options, rmm::mr::get_current_device_resource()),
cudf::logic_error);
EXPECT_THROW(
cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource()),
cudf::logic_error);
}

TEST_F(JsonWriterTest, PlainTable)
Expand All @@ -121,7 +130,9 @@ TEST_F(JsonWriterTest, PlainTable)
.lines(false)
.na_rep("null");

cudf::io::write_json(options_builder.build(), rmm::mr::get_current_device_resource());
cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());

std::string const expected =
R"([{"col1":"a","col2":"d","int":1,"float":1.5,"int16":null},{"col1":"b","col2":"e","int":2,"float":2.5,"int16":2},{"col1":"c","col2":"f","int":3,"float":3.5,"int16":null}])";
Expand Down Expand Up @@ -151,7 +162,9 @@ TEST_F(JsonWriterTest, SimpleNested)
.lines(true)
.na_rep("null");

cudf::io::write_json(options_builder.build(), rmm::mr::get_current_device_resource());
cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());
std::string const expected = R"({"a":1,"b":2,"c":{"d":3},"f":5.5,"g":[1]}
{"a":6,"b":7,"c":{"d":8},"f":10.5}
{"a":1,"b":2,"c":{"e":4},"f":5.5,"g":[2,null]}
Expand Down Expand Up @@ -183,7 +196,9 @@ TEST_F(JsonWriterTest, MixedNested)
.lines(false)
.na_rep("null");

cudf::io::write_json(options_builder.build(), rmm::mr::get_current_device_resource());
cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());
std::string const expected =
R"([{"a":1,"b":2,"c":{"d":[3]},"f":5.5,"g":[{"h":1}]},)"
R"({"a":6,"b":7,"c":{"d":[8]},"f":10.5},)"
Expand Down Expand Up @@ -216,7 +231,8 @@ TEST_F(JsonWriterTest, WriteReadNested)
.na_rep("null")
.build();

cudf::io::write_json(out_options, rmm::mr::get_current_device_resource());
cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource());
std::string const expected = R"({"a":1,"b":2,"c":{"d":3},"f":5.5,"g":[1]}
{"a":6,"b":7,"c":{"d":8},"f":10.5}
{"a":1,"b":2,"c":{"e":4},"f":5.5,"g":[2,null]}
Expand Down Expand Up @@ -291,7 +307,8 @@ TEST_F(JsonWriterTest, WriteReadNested)
mt.schema_info[2].children.clear();
out_options.set_metadata(mt);
out_buffer.clear();
cudf::io::write_json(out_options, rmm::mr::get_current_device_resource());
cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource());

in_options = cudf::io::json_reader_options::builder(
cudf::io::source_info{out_buffer.data(), out_buffer.size()})
Expand All @@ -314,7 +331,8 @@ TEST_F(JsonWriterTest, WriteReadNested)
// without column names
out_options.set_metadata(cudf::io::table_metadata{});
out_buffer.clear();
cudf::io::write_json(out_options, rmm::mr::get_current_device_resource());
cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource());
in_options = cudf::io::json_reader_options::builder(
cudf::io::source_info{out_buffer.data(), out_buffer.size()})
.lines(true)
Expand Down Expand Up @@ -352,7 +370,8 @@ TEST_F(JsonWriterTest, SpecialChars)
.na_rep("null")
.build();

cudf::io::write_json(out_options, rmm::mr::get_current_device_resource());
cudf::io::write_json(
out_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource());
std::string const expected = R"({"\"a\"":1,"'b'":"abcd"}
{"\"a\"":6,"'b'":"b\b\f\n\r\t"}
{"\"a\"":1,"'b'":"\"c\""}
Expand Down Expand Up @@ -385,7 +404,9 @@ TEST_F(JsonWriterTest, NullList)
.lines(true)
.na_rep("null");

cudf::io::write_json(options_builder.build(), rmm::mr::get_current_device_resource());
cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());
std::string const expected = R"({"a":[null],"b":[[1,2,3],[null],[null,null,null],[4,null,5]]}
{"a":[2,null,null,3],"b":null}
{"a":[null,null,4],"b":[[2,null],null]}
Expand Down Expand Up @@ -424,7 +445,9 @@ TEST_F(JsonWriterTest, ChunkedNested)
.na_rep("null")
.rows_per_chunk(8);

cudf::io::write_json(options_builder.build(), rmm::mr::get_current_device_resource());
cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());
std::string const expected =
R"({"a":1,"b":-2,"c":{},"e":[{"f":1}]}
{"a":2,"b":-2,"c":{}}
Expand Down Expand Up @@ -480,7 +503,9 @@ TEST_F(JsonWriterTest, StructAllNullCombinations)
.lines(true)
.na_rep("null");

cudf::io::write_json(options_builder.build(), rmm::mr::get_current_device_resource());
cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());
std::string const expected = R"({}
{"e":1}
{"d":1}
Expand Down Expand Up @@ -542,7 +567,9 @@ TEST_F(JsonWriterTest, Unicode)
.lines(true)
.na_rep("null");

cudf::io::write_json(options_builder.build(), rmm::mr::get_current_device_resource());
cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());
Comment on lines +570 to +572
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can these just be

Suggested change
cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());
cudf::io::write_json(options_builder.build());

We have the same values for the defaults. Not sure why mr was specified in the first place.

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now I see the difference, cudf::get_default_stream vs cudf::test::get_default_stream
does this matter for these tests? I don't see other PRs adding the stream parameter to all tests

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Yes, the stream parameter can be left as is for now. For the moment, cudf::test::get_default_stream is only necessary for the stream tests. That may change in the future, but probably isn't worth planning for right now.

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Thanks for the feedback! I've cleaned up the rmm::mr default parameter in both the calls.

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Not sure I understand what "as is" is in @vyasr 's comment, but it looks like we might be adding the stream parameter to all API calls in the future so we might as do it now.

FWIW, the mr parameter can be removed from write_json calls in this file as well. I'm not blocking the PR on that, though.


std::string const expected =
R"({"col1":"\"\\\/\b\f\n\r\t","col2":"C\u10ae\u226a\u31f3\u434f\u51f9\u6ca6\u738b\u8fbf\u9fb8\ua057\ubbdc\uc2a4\ud3f6\ue4fe\ufd20","int16":null}
Expand Down
73 changes: 73 additions & 0 deletions cpp/tests/streams/io/functions_test.cpp
Original file line number Diff line number Diff line change
@@ -0,0 +1,73 @@
/*
* Copyright (c) 2023, NVIDIA CORPORATION.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/

#include <cudf/io/detail/json.hpp>
#include <cudf/io/json.hpp>
#include <cudf/table/table.hpp>
#include <cudf/table/table_view.hpp>
#include <cudf/types.hpp>

#include <cudf_test/base_fixture.hpp>
#include <cudf_test/column_wrapper.hpp>
#include <cudf_test/default_stream.hpp>
#include <cudf_test/iterator_utilities.hpp>

#include <string>
#include <vector>

class FunctionsTest : public cudf::test::BaseFixture {};

//.dtypes(std::vector<cudf::data_type>{dtype<int32_t>(), dtype<double>()})
TEST_F(FunctionsTest, JSONreader)
{
std::string data = "[1, 1.1]\n[2, 2.2]\n[3, 3.3]\n";
cudf::io::json_reader_options in_options =
cudf::io::json_reader_options::builder(cudf::io::source_info{data.data(), data.size()})
.dtypes(std::vector<cudf::data_type>{cudf::data_type{cudf::type_id::INT32},
cudf::data_type{cudf::type_id::FLOAT64}})
.lines(true)
.legacy(true);
cudf::io::table_with_metadata result = cudf::io::read_json(
in_options, cudf::test::get_default_stream(), rmm::mr::get_current_device_resource());
}

TEST_F(FunctionsTest, JSONwriter)
{
cudf::test::strings_column_wrapper col1{"a", "b", "c"};
cudf::test::strings_column_wrapper col2{"d", "e", "f"};
cudf::test::fixed_width_column_wrapper<int> col3{1, 2, 3};
cudf::test::fixed_width_column_wrapper<float> col4{1.5, 2.5, 3.5};
cudf::test::fixed_width_column_wrapper<int16_t> col5{{1, 2, 3},
cudf::test::iterators::nulls_at({0, 2})};
cudf::table_view tbl_view{{col1, col2, col3, col4, col5}};
cudf::io::table_metadata mt{{{"col1"}, {"col2"}, {"int"}, {"float"}, {"int16"}}};
/*
cudf::table_view tbl_view{{col1}};
cudf::io::table_metadata mt{{{"col1"}}};
*/

std::vector<char> out_buffer;
auto destination = cudf::io::sink_info(&out_buffer);
auto options_builder = cudf::io::json_writer_options_builder(destination, tbl_view)
.include_nulls(true)
.metadata(mt)
.lines(false)
.na_rep("null");

cudf::io::write_json(options_builder.build(),
cudf::test::get_default_stream(),
rmm::mr::get_current_device_resource());
}
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