Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add stream and mr parameters for structs::detail::flatten_nested_columns #12892

Merged
Merged
Show file tree
Hide file tree
Changes from 4 commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
8 changes: 6 additions & 2 deletions cpp/include/cudf/detail/structs/utilities.hpp
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
* Copyright (c) 2020-2022, NVIDIA CORPORATION.
* Copyright (c) 2020-2023, NVIDIA CORPORATION.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
Expand Down Expand Up @@ -164,14 +164,18 @@ class flattened_table {
* @param null_precedence null order for input table
* @param nullability force output to have nullability columns even if input columns
* are all valid
* @param stream CUDA stream used for device memory operations and kernel launches
* @param mr Device memory resource used to allocate new device memory
* @return `flatten_result` with flattened table, flattened column order, flattened null precedence,
* alongside the supporting columns and device_buffers for the flattened table.
*/
[[nodiscard]] flattened_table flatten_nested_columns(
table_view const& input,
std::vector<order> const& column_order,
std::vector<null_order> const& null_precedence,
column_nullability nullability = column_nullability::MATCH_INCOMING);
column_nullability nullability,
rmm::cuda_stream_view stream,
rmm::mr::device_memory_resource* mr = rmm::mr::get_current_device_resource());
ttnghia marked this conversation as resolved.
Show resolved Hide resolved

/**
* @brief Superimpose nulls from a given null mask into the input column, using bitwise AND.
Expand Down
12 changes: 11 additions & 1 deletion cpp/include/cudf/detail/unary.hpp
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
* Copyright (c) 2018-2022, NVIDIA CORPORATION.
* Copyright (c) 2018-2023, NVIDIA CORPORATION.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
Expand Down Expand Up @@ -74,6 +74,16 @@ std::unique_ptr<cudf::column> unary_operation(
rmm::cuda_stream_view stream,
rmm::mr::device_memory_resource* mr = rmm::mr::get_current_device_resource());

/**
* @copydoc cudf::is_valid
*
* @param stream CUDA stream used for device memory operations and kernel launches.
*/
std::unique_ptr<cudf::column> is_valid(
cudf::column_view const& input,
rmm::cuda_stream_view stream,
rmm::mr::device_memory_resource* mr = rmm::mr::get_current_device_resource());
divyegala marked this conversation as resolved.
Show resolved Hide resolved

/**
* @copydoc cudf::cast
*
Expand Down
10 changes: 5 additions & 5 deletions cpp/src/join/hash_join.cu
Original file line number Diff line number Diff line change
Expand Up @@ -299,7 +299,7 @@ hash_join<Hasher>::hash_join(cudf::table_view const& build,

// need to store off the owning structures for some of the views in _build
_flattened_build_table = structs::detail::flatten_nested_columns(
build, {}, {}, structs::detail::column_nullability::FORCE);
build, {}, {}, structs::detail::column_nullability::FORCE, stream);
_build = _flattened_build_table;

if (_is_empty) { return; }
Expand Down Expand Up @@ -357,7 +357,7 @@ std::size_t hash_join<Hasher>::inner_join_size(cudf::table_view const& probe,
if (_is_empty) { return 0; }

auto flattened_probe = structs::detail::flatten_nested_columns(
probe, {}, {}, structs::detail::column_nullability::FORCE);
probe, {}, {}, structs::detail::column_nullability::FORCE, stream);
auto const flattened_probe_table = flattened_probe.flattened_columns();

auto build_table_ptr = cudf::table_device_view::create(_build, stream);
Expand All @@ -382,7 +382,7 @@ std::size_t hash_join<Hasher>::left_join_size(cudf::table_view const& probe,
if (_is_empty) { return probe.num_rows(); }

auto flattened_probe = structs::detail::flatten_nested_columns(
probe, {}, {}, structs::detail::column_nullability::FORCE);
probe, {}, {}, structs::detail::column_nullability::FORCE, stream);
auto const flattened_probe_table = flattened_probe.flattened_columns();

auto build_table_ptr = cudf::table_device_view::create(_build, stream);
Expand All @@ -408,7 +408,7 @@ std::size_t hash_join<Hasher>::full_join_size(cudf::table_view const& probe,
if (_is_empty) { return probe.num_rows(); }

auto flattened_probe = structs::detail::flatten_nested_columns(
probe, {}, {}, structs::detail::column_nullability::FORCE);
probe, {}, {}, structs::detail::column_nullability::FORCE, stream);
auto const flattened_probe_table = flattened_probe.flattened_columns();

auto build_table_ptr = cudf::table_device_view::create(_build, stream);
Expand Down Expand Up @@ -475,7 +475,7 @@ hash_join<Hasher>::compute_hash_join(cudf::table_view const& probe,
"Probe column size is too big for hash join");

auto flattened_probe = structs::detail::flatten_nested_columns(
probe, {}, {}, structs::detail::column_nullability::FORCE);
probe, {}, {}, structs::detail::column_nullability::FORCE, stream);
auto const flattened_probe_table = flattened_probe.flattened_columns();

CUDF_EXPECTS(_build.num_columns() == flattened_probe_table.num_columns(),
Expand Down
8 changes: 6 additions & 2 deletions cpp/src/reductions/struct_minmax_util.cuh
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
* Copyright (c) 2022, NVIDIA CORPORATION.
* Copyright (c) 2022-2023, NVIDIA CORPORATION.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
Expand Down Expand Up @@ -98,7 +98,11 @@ class comparison_binop_generator {

comparison_binop_generator(column_view const& input, rmm::cuda_stream_view stream, bool is_min_op)
: flattened_input{cudf::structs::detail::flatten_nested_columns(
table_view{{input}}, {}, std::vector<null_order>{DEFAULT_NULL_ORDER})},
table_view{{input}},
{},
std::vector<null_order>{DEFAULT_NULL_ORDER},
cudf::structs::detail::column_nullability::MATCH_INCOMING,
stream)},
d_flattened_input_ptr{table_device_view::create(flattened_input, stream)},
is_min_op(is_min_op),
has_nulls{has_nested_nulls(table_view{{input}})},
Expand Down
4 changes: 2 additions & 2 deletions cpp/src/search/contains_table.cu
Original file line number Diff line number Diff line change
Expand Up @@ -326,9 +326,9 @@ rmm::device_uvector<bool> contains_without_lists_or_nans(table_view const& hayst
? structs::detail::column_nullability::FORCE
: structs::detail::column_nullability::MATCH_INCOMING;
auto const haystack_flattened_tables =
structs::detail::flatten_nested_columns(haystack, {}, {}, flatten_nullability);
structs::detail::flatten_nested_columns(haystack, {}, {}, flatten_nullability, stream);
auto const needles_flattened_tables =
structs::detail::flatten_nested_columns(needles, {}, {}, flatten_nullability);
structs::detail::flatten_nested_columns(needles, {}, {}, flatten_nullability, stream);
auto const haystack_flattened = haystack_flattened_tables.flattened_columns();
auto const needles_flattened = needles_flattened_tables.flattened_columns();
auto const haystack_tdv_ptr = table_device_view::create(haystack_flattened, stream);
Expand Down
27 changes: 19 additions & 8 deletions cpp/src/structs/utilities.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -18,11 +18,11 @@
#include <cudf/detail/copy.hpp>
#include <cudf/detail/null_mask.hpp>
#include <cudf/detail/structs/utilities.hpp>
#include <cudf/detail/unary.hpp>
#include <cudf/structs/structs_column_view.hpp>
#include <cudf/table/table.hpp>
#include <cudf/table/table_view.hpp>
#include <cudf/types.hpp>
#include <cudf/unary.hpp>
#include <cudf/utilities/error.hpp>
#include <cudf/utilities/span.hpp>
#include <cudf/utilities/traits.hpp>
Expand Down Expand Up @@ -98,11 +98,20 @@ struct table_flattener {
std::vector<null_order> flat_null_precedence;
column_nullability nullability;

ttnghia marked this conversation as resolved.
Show resolved Hide resolved
rmm::cuda_stream_view stream;
rmm::mr::device_memory_resource* mr;

table_flattener(table_view const& input,
std::vector<order> const& column_order,
std::vector<null_order> const& null_precedence,
column_nullability nullability)
: column_order(column_order), null_precedence(null_precedence), nullability(nullability)
column_nullability nullability,
rmm::cuda_stream_view stream,
rmm::mr::device_memory_resource* mr)
: column_order(column_order),
null_precedence(null_precedence),
nullability(nullability),
stream(stream),
mr(mr)
ttnghia marked this conversation as resolved.
Show resolved Hide resolved
{
superimpose_nulls(input);
fail_if_unsupported_types(input);
Expand All @@ -114,7 +123,7 @@ struct table_flattener {
*/
void superimpose_nulls(table_view const& input_table)
{
auto [table, tmp_nullable_data] = push_down_nulls(input_table, cudf::get_default_stream());
auto [table, tmp_nullable_data] = push_down_nulls(input_table, stream, mr);
this->input = std::move(table);
this->nullable_data = std::move(tmp_nullable_data);
}
Expand Down Expand Up @@ -143,10 +152,10 @@ struct table_flattener {
// sure the flattening results are tables having the same number of columns.

if (nullability == column_nullability::FORCE || col.has_nulls()) {
validity_as_column.push_back(cudf::is_valid(col));
validity_as_column.push_back(cudf::detail::is_valid(col, stream, mr));
if (col.has_nulls()) {
// copy bitmask is needed only if the column has null
validity_as_column.back()->set_null_mask(copy_bitmask(col));
validity_as_column.back()->set_null_mask(cudf::detail::copy_bitmask(col, stream, mr));
}
flat_columns.push_back(validity_as_column.back()->view());
if (not column_order.empty()) { flat_column_order.push_back(col_order); } // doesn't matter.
Expand Down Expand Up @@ -197,12 +206,14 @@ struct table_flattener {
flattened_table flatten_nested_columns(table_view const& input,
std::vector<order> const& column_order,
std::vector<null_order> const& null_precedence,
column_nullability nullability)
column_nullability nullability,
rmm::cuda_stream_view stream,
rmm::mr::device_memory_resource* mr)
{
auto const has_struct = std::any_of(input.begin(), input.end(), is_struct);
if (not has_struct) { return flattened_table{input, column_order, null_precedence, {}, {}}; }

return table_flattener{input, column_order, null_precedence, nullability}();
return table_flattener{input, column_order, null_precedence, nullability, stream, mr}();
}

namespace {
Expand Down
65 changes: 38 additions & 27 deletions cpp/tests/structs/utilities_tests.cpp
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
* Copyright (c) 2021-2022, NVIDIA CORPORATION.
* Copyright (c) 2021-2023, NVIDIA CORPORATION.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
Expand Down Expand Up @@ -27,6 +27,7 @@
#include <cudf/detail/null_mask.hpp>
#include <cudf/detail/structs/utilities.hpp>
#include <cudf/null_mask.hpp>
#include <cudf/utilities/default_stream.hpp>

template <typename T>
using nums = cudf::test::fixed_width_column_wrapper<T, int32_t>;
Expand Down Expand Up @@ -54,9 +55,10 @@ TYPED_TEST(TypedStructUtilitiesTest, ListsAtTopLevel)

auto table = cudf::table_view{{lists_col, nums_col}};

CUDF_TEST_EXPECT_TABLES_EQUAL(table,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE));
CUDF_TEST_EXPECT_TABLES_EQUAL(
table,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE, cudf::get_default_stream()));
}

TYPED_TEST(TypedStructUtilitiesTest, NestedListsUnsupported)
Expand All @@ -74,7 +76,8 @@ TYPED_TEST(TypedStructUtilitiesTest, NestedListsUnsupported)
cudf::table_view{{nums_col, structs_col}},
{},
{},
cudf::structs::detail::column_nullability::FORCE),
cudf::structs::detail::column_nullability::FORCE,
cudf::get_default_stream()),
cudf::logic_error);
}

Expand All @@ -90,9 +93,10 @@ TYPED_TEST(TypedStructUtilitiesTest, NoStructs)

auto table = cudf::table_view{{nums_col, strings_col, nuther_nums_col}};

CUDF_TEST_EXPECT_TABLES_EQUAL(table,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE));
CUDF_TEST_EXPECT_TABLES_EQUAL(
table,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE, cudf::get_default_stream()));
}

TYPED_TEST(TypedStructUtilitiesTest, SingleLevelStruct)
Expand All @@ -116,9 +120,10 @@ TYPED_TEST(TypedStructUtilitiesTest, SingleLevelStruct)
auto expected = cudf::table_view{
{expected_nums_col_1, expected_structs_col, expected_nums_col_2, expected_strings_col}};

CUDF_TEST_EXPECT_TABLES_EQUAL(expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE));
CUDF_TEST_EXPECT_TABLES_EQUAL(
expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE, cudf::get_default_stream()));
}

TYPED_TEST(TypedStructUtilitiesTest, SingleLevelStructWithNulls)
Expand All @@ -144,9 +149,10 @@ TYPED_TEST(TypedStructUtilitiesTest, SingleLevelStructWithNulls)
auto expected = cudf::table_view{
{expected_nums_col_1, expected_structs_col, expected_nums_col_2, expected_strings_col}};

CUDF_TEST_EXPECT_TABLES_EQUAL(expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE));
CUDF_TEST_EXPECT_TABLES_EQUAL(
expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE, cudf::get_default_stream()));
}

TYPED_TEST(TypedStructUtilitiesTest, StructOfStruct)
Expand Down Expand Up @@ -183,9 +189,10 @@ TYPED_TEST(TypedStructUtilitiesTest, StructOfStruct)
expected_nums_col_3,
expected_strings_col}};

CUDF_TEST_EXPECT_TABLES_EQUAL(expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE));
CUDF_TEST_EXPECT_TABLES_EQUAL(
expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE, cudf::get_default_stream()));
}

TYPED_TEST(TypedStructUtilitiesTest, StructOfStructWithNullsAtLeafLevel)
Expand Down Expand Up @@ -223,9 +230,10 @@ TYPED_TEST(TypedStructUtilitiesTest, StructOfStructWithNullsAtLeafLevel)
expected_nums_col_3,
expected_strings_col}};

CUDF_TEST_EXPECT_TABLES_EQUAL(expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE));
CUDF_TEST_EXPECT_TABLES_EQUAL(
expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE, cudf::get_default_stream()));
}

TYPED_TEST(TypedStructUtilitiesTest, StructOfStructWithNullsAtTopLevel)
Expand Down Expand Up @@ -264,9 +272,10 @@ TYPED_TEST(TypedStructUtilitiesTest, StructOfStructWithNullsAtTopLevel)
expected_nums_col_3,
expected_strings_col}};

CUDF_TEST_EXPECT_TABLES_EQUAL(expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE));
CUDF_TEST_EXPECT_TABLES_EQUAL(
expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE, cudf::get_default_stream()));
}

TYPED_TEST(TypedStructUtilitiesTest, StructOfStructWithNullsAtAllLevels)
Expand Down Expand Up @@ -305,9 +314,10 @@ TYPED_TEST(TypedStructUtilitiesTest, StructOfStructWithNullsAtAllLevels)
expected_nums_col_3,
expected_strings_col}};

CUDF_TEST_EXPECT_TABLES_EQUAL(expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE));
CUDF_TEST_EXPECT_TABLES_EQUAL(
expected,
cudf::structs::detail::flatten_nested_columns(
table, {}, {}, cudf::structs::detail::column_nullability::FORCE, cudf::get_default_stream()));
}

TYPED_TEST(TypedStructUtilitiesTest, ListsAreUnsupported)
Expand All @@ -327,7 +337,8 @@ TYPED_TEST(TypedStructUtilitiesTest, ListsAreUnsupported)
cudf::table_view{{structs_with_lists_col}},
{},
{},
cudf::structs::detail::column_nullability::FORCE),
cudf::structs::detail::column_nullability::FORCE,
cudf::get_default_stream()),
cudf::logic_error);
}

Expand Down