This repository is preliminary and contains all the processed data and results related to CHISEL project, those related to cancer patient S0 in folder patientS0 and those related to cancer patient S1 in folder patientS1. Additional patients, including results for DOP-PCR data from patients P2 of Kim et al. (2018) are in the folder others.
For each patient, a folder calls contains the processed data and the results for each tumor section or dataset, and a folder clones contains a mapping for the identified tumor clones.
In addition for patientS0, a folder snvs contains the assignments, read counts, and variant-allele frequency for all the identified SNVs.
The repository also includes a folder demos which includes data used by the CHISEL demos.
Additional information and description will be available soon.