Update config #19
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| # This is a basic workflow to help you get started with Actions | |
| name: Dadaist-CI | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| defaults: | |
| run: | |
| # This is needed for miniconda, see: | |
| # https://github.com/marketplace/actions/setup-miniconda#important. | |
| shell: bash -l {0} | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build" | |
| build: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v2 | |
| # Runs a single command using the runners shell | |
| - name: Setup Miniconda | |
| # You may pin to the exact commit or the version. | |
| # uses: conda-incubator/setup-miniconda@35d1405e78aa3f784fe3ce9a2eb378d5eeb62169 | |
| uses: conda-incubator/[email protected] | |
| with: | |
| # Conda configuration. Comma separated list of channels to use in order of priority. See https://docs.conda.io/projects/conda/en/latest/user-guide/configuration/ for more information. | |
| channels: "conda-forge,bioconda,defaults" | |
| # Experimental. Use mamba as soon as available (either as provided by `mamba-in-installer` or installation by `mamba-version`) | |
| use-mamba: true | |
| # Architecture of Miniconda that should be installed. Available options on GitHub-hosted runners are "x86" and "x64". Default is "x64". | |
| architecture: "x64" | |
| mamba-version: "*" | |
| - name: Install requirements. | |
| run: mamba install -y --only-deps dadaist2 | |
| - name: Test Dadaist | |
| run: bash test/all.sh | |