Run example notebooks CI (#791)

* run notebooks init

* change kernel name

* change kernel name

* change kernel name

* rm docs

* add nb

* fix nb

* fig dpi

* update model object

* no output

* test mmm notebooks

* fix path

* graphviz

* sudo

* paralelize and Path

* reqs

* undo

* comments

* try budget allocation

* add quickstart

* ignore budget allocation

* add make command

* use make

.github/workflows/ci.yml

@@ -64,6 +64,23 @@ jobs:
           name: "test_slow"
           fail_ci_if_error: false
 
+  example_notebooks:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v3
+    - name: Set up Python
+      uses: actions/setup-python@v3
+      with:
+        python-version: "3.12"
+    - name: Install dependencies
+      run: |
+        sudo apt-get install graphviz
+        pip install -e .[docs]
+        pip install -e .[test]
+    - name: Run notebooks
+      run: make run_notebooks
+
+
   all:
     if: ${{ always() }}
     runs-on: ubuntu-latest

Makefile

@@ -1,4 +1,4 @@
-.PHONY: init lint check_lint test html cleandocs
+.PHONY: init lint check_lint test html cleandocs run_notebooks
 
 init:
 	python3 -m pip install -e .
@@ -23,3 +23,6 @@ html:
 
 cleandocs:
 	rm -r "docs/build" "docs/jupyter_execute" "docs/source/api/generated"
+
+run_notebooks:
+	python scripts/run_notebooks/runner.py