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Refactor macros #80

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Nov 20, 2023
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91 changes: 27 additions & 64 deletions pyiron_workflow/atomistics_library/macronodes.py
Original file line number Diff line number Diff line change
@@ -1,5 +1,4 @@
from pyiron_workflow.macro import Macro, macro_node
from pyiron_workflow.function import single_value_node
from pyiron_workflow.atomistics_library.calculatornodes import calc_with_calculator
from pyiron_workflow.atomistics_library.tasknodes import (
get_elastic_matrix_task_generator,
Expand All @@ -10,77 +9,41 @@
)


@single_value_node("instance")
def get_instance(instance):
return instance
def atomistics_meta_macro(task_generator_node_class, macro_name) -> type[Macro]:
def generic_macro(wf: Macro) -> None:
wf.tasks = task_generator_node_class()
wf.structures = generate_structures(instance=wf.tasks)
wf.calc = calc_with_calculator(task_dict=wf.structures)
wf.fit = analyse_structures(instance=wf.tasks, output_dict=wf.calc)
inputs_map = {
# Dynamically expose _all_ task generator input directly on the macro
"tasks__" + s: s
for s in wf.tasks.inputs.labels
}
inputs_map["calc__calculator"] = "calculator"
wf.inputs_map = inputs_map
wf.outputs_map = {"fit__result_dict": "result_dict"}
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generic_macro.__name__ = macro_name

@macro_node()
def internal_macro(wf: Macro) -> None:
wf.get_instance = get_instance()
wf.generate_structures = generate_structures(instance=wf.get_instance)
wf.calc_with_calculator = calc_with_calculator(task_dict=wf.generate_structures)
wf.fit = analyse_structures(
instance=wf.get_instance, output_dict=wf.calc_with_calculator
)
wf.inputs_map = {
"get_instance__instance": "instance",
"calc_with_calculator__calculator": "calculator",
}
wf.outputs_map = {"fit__fit_dict": "fit_dict"}
return macro_node()(generic_macro)


@macro_node()
def get_energy_volume_curve(wf: Macro) -> None:
wf.get_task_generator = get_evcurve_task_generator()
wf.internal = internal_macro(instance=wf.get_task_generator)
wf.inputs_map = {
"get_task_generator__structure": "structure",
"get_task_generator__num_points": "num_points",
"get_task_generator__fit_type": "fit_type",
"get_task_generator__fit_order": "fit_order",
"get_task_generator__vol_range": "vol_range",
"get_task_generator__axes": "axes",
"get_task_generator__strains": "strains",
"internal__calculator": "calculator",
}
wf.outputs_map = {"internal__fit_dict": "fit_dict"}

elastic_matrix = atomistics_meta_macro(
get_elastic_matrix_task_generator, "elastic_matrix"
)

@macro_node()
def get_elastic_matrix(wf: Macro) -> None:
wf.get_task_generator = get_elastic_matrix_task_generator()
wf.internal = internal_macro(instance=wf.get_task_generator)
wf.inputs_map = {
"get_task_generator__structure": "structure",
"get_task_generator__num_of_point": "num_of_point",
"get_task_generator__eps_range": "eps_range",
"get_task_generator__sqrt_eta": "sqrt_eta",
"get_task_generator__fit_order": "fit_order",
"internal__calculator": "calculator",
}
wf.outputs_map = {"internal__fit_dict": "fit_dict"}

energy_volume_curve = atomistics_meta_macro(
get_evcurve_task_generator,
"energy_volume_curve",
)

@macro_node()
def get_phonons(wf: Macro) -> None:
wf.get_task_generator = get_phonons_task_generator()
wf.internal = internal_macro(instance=wf.get_task_generator)
wf.inputs_map = {
"get_task_generator__structure": "structure",
"get_task_generator__interaction_range": "interaction_range",
"get_task_generator__factor": "factor",
"get_task_generator__displacement": "displacement",
"get_task_generator__dos_mesh": "dos_mesh",
"get_task_generator__primitive_matrix": "primitive_matrix",
"get_task_generator__number_of_snapshots": "number_of_snapshots",
"internal__calculator": "calculator",
}
wf.outputs_map = {"internal__fit_dict": "fit_dict"}
phonons = atomistics_meta_macro(get_phonons_task_generator, "phonons")


nodes = [
get_energy_volume_curve,
get_elastic_matrix,
get_phonons,
elastic_matrix,
energy_volume_curve,
phonons,
]
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