Add write_input() before transferring files to remote

pyiron_base/jobs/job/runfunction.py

@@ -1,14 +1,14 @@
 # coding: utf-8
 # Copyright (c) Max-Planck-Institut für Eisenforschung GmbH - Computational Materials Design (CM) Department
 # Distributed under the terms of "New BSD License", see the LICENSE file.
-from concurrent.futures import ProcessPoolExecutor
-from datetime import datetime
 import multiprocessing
 import os
 import posixpath
 import shutil
 import subprocess
-from typing import Optional, List, Tuple
+from concurrent.futures import ProcessPoolExecutor
+from datetime import datetime
+from typing import List, Optional, Tuple
 
 from jinja2 import Template
 from pyiron_snippets.deprecate import deprecate
@@ -18,7 +18,6 @@
 from pyiron_base.state.signal import catch_signals
 from pyiron_base.utils.instance import static_isinstance
 
-
 try:
     import flux.job
 
@@ -486,6 +485,7 @@ def run_job_with_runmode_queue(job):
             + job.project_hdf5.h5_path
             + " --submit"
         )
+        job.project_hdf5.create_working_directory()
         job.write_input()
         state.queue_adapter.transfer_file_to_remote(
             file=job.project_hdf5.file_name, transfer_back=False