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Add flux executor shutdown #479

Merged
merged 8 commits into from
Nov 6, 2024
Merged

Add flux executor shutdown #479

merged 8 commits into from
Nov 6, 2024

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jan-janssen
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@jan-janssen jan-janssen commented Nov 6, 2024

Summary by CodeRabbit

  • New Features

    • Enhanced examples in the Jupyter notebook for better clarity and efficiency when using the Executor class.
  • Bug Fixes

    • Streamlined code structure by removing unnecessary context management, ensuring consistent functionality for task submission and result retrieval.

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coderabbitai bot commented Nov 6, 2024

Walkthrough

The changes in this pull request involve modifications to the Jupyter notebook notebooks/examples.ipynb, specifically enhancing the implementation of the executorlib.Executor class. The previous use of the flux.job.FluxExecutor context manager has been removed, simplifying the instantiation of the Executor. The new implementation directly initializes the Executor with a backend parameter set to "flux", streamlining the code while preserving the functionality for task submission and result retrieval.

Changes

File Change Summary
notebooks/examples.ipynb Updated to use executorlib.Executor directly with backend="flux" instead of FluxExecutor. Simplified code structure while maintaining functionality for task execution.

Sequence Diagram(s)

sequenceDiagram
    participant User
    participant Executor
    participant Task

    User->>Executor: Initialize with backend="flux"
    Executor->>Task: Submit task
    Task-->>Executor: Task completed
    Executor-->>User: Return results
Loading

🐇 "In the notebook where tasks do play,
The Executor leads the way.
No more flux to intertwine,
Just simple calls, all so fine!
With clarity, we hop and cheer,
For streamlined code is finally here!" 🐇


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@jan-janssen jan-janssen linked an issue Nov 6, 2024 that may be closed by this pull request
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Actionable comments posted: 0

🧹 Outside diff range and nitpick comments (1)
executorlib/interactive/flux.py (1)

103-105: Good addition of executor cleanup, but could be more robust.

The addition of flux executor shutdown is a good improvement for resource cleanup. However, consider these enhancements:

Consider applying this diff to make the shutdown more robust:

         # shutdown flux executor
         if self._flux_executor is not None:
-            self._flux_executor.shutdown(wait=wait)
+            try:
+                self._flux_executor.shutdown(wait=wait)
+            except Exception as e:
+                # Log but don't re-raise as we want to continue cleanup
+                print(f"Warning: Error during flux executor shutdown: {e}")
+            finally:
+                self._flux_executor = None  # Clear reference

This change:

  1. Adds error handling to prevent shutdown failures from blocking cleanup
  2. Cleans up the executor reference after shutdown
  3. Maintains the existing behavior while being more resilient
📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Reviewing files that changed from the base of the PR and between d85a615 and c760a72.

📒 Files selected for processing (2)
  • executorlib/interactive/flux.py (1 hunks)
  • notebooks/examples.ipynb (8 hunks)
🔇 Additional comments (6)
executorlib/interactive/flux.py (1)

103-105: Verify shutdown behavior in nested executor scenarios.

The shutdown implementation looks correct, but given that the class supports nested executors (via flux_executor_nesting), we should verify the shutdown behavior in nested scenarios.

Let's check for any special handling of nested executors in the codebase:

✅ Verification successful

Let me gather more information about the nested executor handling.


Based on the search results, I can now generate the final response:

Shutdown implementation is correct for nested executors

The current shutdown implementation is appropriate because:

  • Nested executors are only used during job submission via JobspecV1.from_nest_command() and don't create a hierarchy of executor instances
  • The _flux_executor is the only executor instance that needs cleanup, regardless of nesting
  • The nesting flag (flux_executor_nesting) only affects the job specification during bootup and doesn't impact the shutdown sequence
🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Search for nested executor handling patterns
rg -l "flux_executor_nesting|nest_command" --type py

# Look for any existing shutdown handling of nested executors
ast-grep --pattern 'if self._flux_executor_nesting {
  $$$
}'

Length of output: 240


Script:

#!/bin/bash
# Check the implementation details of flux executor nesting
rg -A 10 "flux_executor_nesting" --type py

# Look for any initialization or setup of nested executors
ast-grep --pattern 'def __init__($$$) {
  $$$
  self._flux_executor_nesting = $_
  $$$
}'

# Check for any other shutdown related patterns with nesting
rg -A 5 "shutdown.*nest|nest.*shutdown" --type py

Length of output: 16361

notebooks/examples.ipynb (5)

73-75: LGTM! Simplified initialization pattern.

The simplified initialization improves readability while maintaining the same functionality.


108-120: LGTM! Consistent parallel execution setup.

The parallel execution setup is correctly maintained with the simplified initialization pattern.


526-533: LGTM! GPU configuration is properly set.

The GPU allocation is correctly configured with the simplified initialization pattern.


638-651: LGTM! Clear demonstration of function dependencies.

The example effectively demonstrates chained computations with proper resource allocation.


468-475: LGTM! Verify MPI configuration.

The MPI configuration is correct with the simplified initialization. The pmix mode is properly set for OpenMPI compatibility.

✅ Verification successful

Let me gather more information about the MPI configuration and pmix usage.


MPI configuration is correctly set for OpenMPI v5 compatibility

The code's pmix configuration is correct and well-documented. The documentation in docs/installation.md explicitly states that OpenMPI version 5 requires pmix mode, and the example notebook correctly sets flux_executor_pmi_mode="pmix". The environment also includes the required flux-pmix plugin (version 0.5.0) in the dependencies.

Key validations:

  • Documentation confirms OpenMPI v5 requires pmix mode
  • Required flux-pmix plugin is included in dependencies
  • Input validation in inputcheck.py confirms pmix is a valid PMI mode for Flux
  • Executor properly documents the pmix requirement for OpenMPI v5 in its parameters
🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Verify OpenMPI version to confirm pmix compatibility
rg -l "OpenMPI" | xargs -I {} rg "OpenMPI.*5\." {} || echo "OpenMPI version not found or not version 5.x"

Length of output: 153


Script:

#!/bin/bash
# Search for MPI and pmix related configurations
rg -A 5 -B 5 "pmix|PMI" 

# Also check for any MPI configuration documentation
fd -e md -e rst -e txt | xargs rg -l "MPI|mpi"

Length of output: 12225

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Actionable comments posted: 0

🧹 Outside diff range and nitpick comments (2)
notebooks/examples.ipynb (2)

332-339: LGTM: Data handling example is well structured

The example clearly demonstrates data handling with preloaded values through init_function. The explicit block_allocation=True parameter helps emphasize its importance for this functionality.

Consider adding a comment explaining that block_allocation=True is required for the init_function to work effectively.


630-643: LGTM: Coupled functions example effectively demonstrates dependencies

The example clearly shows how to chain function executions using futures while maintaining proper resource control through individual resource dictionaries.

Consider adding a comment explaining that the resource specifications can be different for each task in the chain, as this is a powerful feature for optimizing resource usage.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Reviewing files that changed from the base of the PR and between c760a72 and b765a4c.

📒 Files selected for processing (1)
  • notebooks/examples.ipynb (8 hunks)
🔇 Additional comments (3)
notebooks/examples.ipynb (3)

72-74: LGTM: API simplification improves usability

The change simplifies the API by removing the nested FluxExecutor context manager while maintaining the same functionality through the backend="flux" parameter.


106-118: LGTM: Resource assignment example maintains clarity

The example effectively demonstrates resource assignment while using the simplified API. The code structure is clean and the resource specification is clear.


462-469: LGTM: MPI example properly handles resource requirements

The example correctly demonstrates MPI usage with proper resource specification and PMI mode configuration for OpenMPI 5 compatibility.

@jan-janssen jan-janssen merged commit 2132028 into main Nov 6, 2024
26 checks passed
@jan-janssen jan-janssen deleted the flux_shutdown branch November 6, 2024 20:16
@coderabbitai coderabbitai bot mentioned this pull request Nov 20, 2024
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[feature] Combine with Statement from flux and executorlib
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