Merge branch 'main' into dependabot/pip/h5py-3.12.1

pyiron · Oct 17, 2024 · f752dca · f752dca
2 parents 2fcc7b6 + d253faf
commit f752dca
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Showing 8 changed files with 13 additions and 12 deletions.
diff --git a/.ci_support/environment-docs.yml b/.ci_support/environment-docs.yml
@@ -7,9 +7,9 @@ dependencies:
 - myst-parser
 - numpy
 - openmpi
-- cloudpickle =3.0.0
+- cloudpickle =3.1.0
 - mpi4py =4.0.1
 - pyzmq =26.2.0
 - flux-core
 - jupyter-book =1.0.0
-- h5py =3.12.1
+- h5py =3.12.1
diff --git a/.ci_support/environment-mini.yml b/.ci_support/environment-mini.yml
@@ -3,5 +3,5 @@ channels:
 dependencies:
 - python
 - numpy
-- cloudpickle =3.0.0
+- cloudpickle =3.1.0
 - pyzmq =26.0.3
diff --git a/.ci_support/environment-mpich.yml b/.ci_support/environment-mpich.yml
@@ -4,11 +4,11 @@ dependencies:
 - python
 - numpy
 - mpich
-- cloudpickle =3.0.0
+- cloudpickle =3.1.0
 - mpi4py =4.0.1
 - pyzmq =26.2.0
 - h5py =3.12.1
 - matplotlib =3.9.2
-- networkx =3.4
+- networkx =3.4.1
 - pygraphviz =1.14
 - ipython =8.28.0
diff --git a/.ci_support/environment-openmpi.yml b/.ci_support/environment-openmpi.yml
@@ -4,11 +4,11 @@ dependencies:
 - python
 - numpy
 - openmpi
-- cloudpickle =3.0.0
+- cloudpickle =3.1.0
 - mpi4py =4.0.1
 - pyzmq =26.2.0
 - h5py =3.12.1
 - matplotlib =3.9.2
-- networkx =3.4
+- networkx =3.4.1
 - pygraphviz =1.14
 - ipython =8.28.0
diff --git a/.ci_support/environment-win.yml b/.ci_support/environment-win.yml
@@ -4,11 +4,11 @@ dependencies:
 - python
 - numpy
 - msmpi
-- cloudpickle =3.0.0
+- cloudpickle =3.1.0
 - mpi4py =4.0.1
 - pyzmq =26.2.0
 - h5py =3.12.1
 - matplotlib =3.9.2
-- networkx =3.4
+- networkx =3.4.1
 - pygraphviz =1.14
 - ipython =8.28.0
diff --git a/.github/workflows/dependabot.yml b/.github/workflows/dependabot.yml
@@ -26,6 +26,7 @@ jobs:
           sed -i "/${package}/s/${from}/${to}/g" .ci_support/environment-openmpi.yml
           sed -i "/${package}/s/${from}/${to}/g" .ci_support/environment-win.yml
           sed -i "/${package}/s/${from}/${to}/g" .ci_support/environment-docs.yml
+          sed -i "/${package}/s/${from}/${to}/g" binder/environment.yml
       - name: UpdateDependabotPR commit
         run: |
           git config --local user.email "[email protected]"

diff --git a/binder/environment.yml b/binder/environment.yml
@@ -4,7 +4,7 @@ dependencies:
 - python
 - numpy
 - openmpi
-- cloudpickle =3.0.0
+- cloudpickle =3.1.0
 - mpi4py =4.0.1
 - pyzmq =26.2.0
 - flux-core =0.59.0

diff --git a/pyproject.toml b/pyproject.toml
@@ -24,7 +24,7 @@ classifiers = [
     "Programming Language :: Python :: 3.12",
 ]
 dependencies = [
-    "cloudpickle==3.0.0",
+    "cloudpickle==3.1.0",
     "pyzmq==26.2.0",
 ]
 dynamic = ["version"]
@@ -42,7 +42,7 @@ hdf = [
 graph = [
     "pygraphviz==1.14",
     "matplotlib==3.9.2",
-    "networkx==3.4",
+    "networkx==3.4.1",
     "ipython==8.28.0",
 ]