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| name: Python package | ||
|
|
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| on: | ||
| push: | ||
| branches: [ master ] | ||
| pull_request: | ||
| branches: [ master ] | ||
| release: | ||
| types: [ created ] | ||
|
|
||
| jobs: | ||
| lint: | ||
| runs-on: ubuntu-latest | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| python-version: [3.8] | ||
| name: "lint | Python ${{ matrix.python-version }}" | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - name: Set up Python ${{ matrix.python-version }} | ||
| uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Install dependencies | ||
| run: | | ||
| python -m pip install --upgrade pip | ||
| pip install flake8 | ||
| pip install . | ||
| - name: Setup flake8 annotations | ||
| uses: rbialon/flake8-annotations@v1 | ||
| - name: Run flake8 | ||
| run: | | ||
| flake8 clifford --show-source --statistics | ||
| test: | ||
| defaults: | ||
| run: | ||
| # conda needs this to activate environments properly | ||
| shell: bash -l {0} | ||
| needs: lint | ||
| runs-on: ubuntu-latest | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| include: | ||
| # fastest jobs first | ||
| # This job currently fails | ||
| # - python-version: 3.8 | ||
| # name: without JIT | ||
| # disable_jit: 1 | ||
| - python-version: 3.8 | ||
| name: doctests | ||
| mode: doctests | ||
| # really slow job next, so it runs in parallel with the others | ||
| - python-version: 3.8 | ||
| name: slow tests | ||
| mode: very_slow | ||
| - python-version: 3.5 | ||
| name: default | ||
| - python-version: 3.8 | ||
| name: default | ||
| - python-version: 3.8 | ||
| name: conda | ||
| conda: true | ||
| - python-version: 3.8 | ||
| name: benchmarks | ||
| mode: bench | ||
|
|
||
| name: "build | ${{ matrix.name }} | Python ${{matrix.python-version}}" | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
|
|
||
| # python / pip | ||
| - name: Set up Python ${{ matrix.python-version }} | ||
| if: "!matrix.conda" | ||
| uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Install dependencies | ||
| if: "!matrix.conda" | ||
| run: | | ||
| python -m pip install --upgrade pip; | ||
| pip install . --prefer-binary; | ||
| # test dependencies | ||
| pip install --upgrade pytest pytest-cov pytest-benchmark IPython | ||
| # conda | ||
| - name: Set up Python ${{ matrix.python-version }} (conda) | ||
| if: matrix.conda | ||
| uses: conda-incubator/setup-miniconda@v2 | ||
| with: | ||
| auto-update-conda: true | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Install dependencies (conda) | ||
| if: matrix.conda | ||
| run: | | ||
| echo $CONDA/bin >> $GITHUB_PATH; | ||
| conda install \ | ||
| "numpy>=1.17.0" \ | ||
| scipy \ | ||
| pip \ | ||
| IPython \ | ||
| h5py; | ||
| conda install -c conda-forge sparse; | ||
| conda install -c numba "numba>=0.45.1"; | ||
| # make sure in conda we do not overwrite dependencies with pip | ||
| python setup.py develop --no-deps; | ||
| # test dependencies | ||
| python -m pip install --upgrade pytest pytest-cov pytest-benchmark; | ||
| - name: Test with pytest | ||
| env: | ||
| MODE: ${{ matrix.mode }} | ||
| NUMBA_DISABLE_JIT: ${{ matrix.disable_jit }} | ||
| run: | | ||
| PYTEST_ARGS=(); | ||
| if [[ "${MODE}" == "bench" ]]; then | ||
| PYTEST_ARGS+=(--benchmark-only); | ||
| else | ||
| PYTEST_ARGS+=(--benchmark-skip); | ||
| fi; | ||
| if [[ "${MODE}" == "very_slow" ]]; then | ||
| PYTEST_ARGS+=(-m "veryslow"); | ||
| else | ||
| PYTEST_ARGS+=(-m "not veryslow"); | ||
| fi; | ||
| if [[ "${MODE}" == "doctests" ]]; then | ||
| PYTEST_ARGS+=(--doctest-modules --ignore clifford/test); | ||
| fi; | ||
| # `python -m` ensures we dispatch to conda if appropriate | ||
| python -m pytest \ | ||
| "${PYTEST_ARGS[@]}" \ | ||
| --color=yes \ | ||
| -o junit_family=legacy \ | ||
| --junitxml=junit/test-results.xml \ | ||
| --durations=25 \ | ||
| --cov=clifford \ | ||
| --cov-branch; | ||
| # This only publishes result for the last run right now | ||
| # - name: Publish Test Report | ||
| # uses: mikepenz/action-junit-report@v2 | ||
| # if: ${{ always() }} | ||
| # with: | ||
| # report_paths: 'junit/test-results.xml' | ||
| - uses: codecov/codecov-action@v1 | ||
|
|
||
| deploy: | ||
| needs: test | ||
| runs-on: ubuntu-latest | ||
| name: deploy | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - name: Set up Python ${{ matrix.python-version }} | ||
| uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: "Install" | ||
| run: | | ||
| python -m pip install --upgrade pip; | ||
| python -m pip install build | ||
| python -m build --sdist --wheel --outdir dist/ | ||
| - uses: actions/upload-artifact@v2 | ||
| with: | ||
| name: dist | ||
| path: dist | ||
| - uses: pypa/gh-action-pypi-publish@release/v1 | ||
| if: startsWith(github.ref, 'refs/tags/v') | ||
| with: | ||
| user: __token__ | ||
| password: ${{ secrets.PYPI_PASSWORD }} |
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