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Bump the python-packages group with 2 updates #190

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@dependabot dependabot bot commented on behalf of github Jan 8, 2024

Bumps the python-packages group with 2 updates: scikit-image and numpy.

Updates scikit-image from 0.19.3 to 0.22.0

Release notes

Sourced from scikit-image's releases.

v0.22.0

No release notes provided.

v0.22.0rc1

scikit-image 0.22.0rc1

We're happy to announce the release of scikit-image 0.22.0rc1!

New Features

  • Add new image sequence skimage.data.palisades_of_vogt showing in-vivo tissue of the palisades of Vogt (#6858).

Performance

  • Add lazy loading to the skimage.feature module (#6983).
  • Add lazy loading to the skimage.graph submodule (#6985).
  • Add lazy loading to the skimage.measure submodule (#6999).
  • Add lazy loading to the skimage.transform submodule (#7009).
  • Add lazy loading to the skimage.restoration submodule (#7021).
  • Add lazy loading to the skimage.registration submodule (#7032).
  • Avoid unnecessary padding in skimage.measure.block_resize (#7092).

Bug Fixes

  • Add num_pixels and coords_scaled to regionprops_table (#7039).
  • Update video.rst (#7076).
  • For uniform intensity images, return intensity value as threshold (#7098).
  • Fix color conversion error (#7116).
  • Make phase_cross_correlation return ndarray when disambiguate=True (#7112).
  • Allow extra_properties of non equal lengths to be passed correctly to regionprops_table (#7136).

API Changes

  • Make PyWavelets an optional dependency which is only required for skimage.restoration.denoise_wavelet and skimage.restoration.estimate_sigma (#7156).
  • Remove deprecated skimage.filters.inverse. Use skimage.filters.filter_inverse instead (#7161).
  • Remove deprecated function skimage.filters.ridges.compute_hessian_eigenvalues. Use skimage.feature.hessian_matrix_eigvals on the results of skimage.feature.hessian_matrix instead (#7162).
  • Remove deprecated automatic detection of the color channel in skimage.filters.gaussian. channel_axis=None now indicates a grayscale image. Set the color channel with channel_axis=-1 explicitly (#7164).
  • Change number of returned arguments in skimage.registration.phase_cross_correlation. The function now always returns the 3 arguments shift, error, and phasediff (#7166).
  • Deprecate return_error in skimage.registration.phase_cross_correlation (#7174).

Maintenance

  • Don't test numpy prerelease on azure (#6996).
  • Drop Python 3.8 support per SPEC 0 (#6990).
  • Upper pin imageio (#7002).
  • Update core dependencies per SPEC0 (#7005).
  • meson: allow proper selection of NumPy, Pythran in cross builds (#7003).
  • Unpin imageio and add warningfilter (#7006).
  • Update to latest attach-next-milestone action (#7014).
  • Avoid deprecated auto-removal of overlapping axes in thresholding example (#7026).

... (truncated)

Commits

Updates numpy from 1.26.2 to 1.26.3

Release notes

Sourced from numpy's releases.

v1.26.3

NumPy 1.26.3 Release Notes

NumPy 1.26.3 is a maintenance release that fixes bugs and regressions discovered after the 1.26.2 release. The most notable changes are the f2py bug fixes. The Python versions supported by this release are 3.9-3.12.

Compatibility

f2py will no longer accept ambiguous -m and .pyf CLI combinations. When more than one .pyf file is passed, an error is raised. When both -m and a .pyf is passed, a warning is emitted and the -m provided name is ignored.

Improvements

f2py now handles common blocks which have kind specifications from modules. This further expands the usability of intrinsics like iso_fortran_env and iso_c_binding.

Contributors

A total of 18 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • @​DWesl
  • @​Illviljan
  • Alexander Grund
  • Andrea Bianchi +
  • Charles Harris
  • Daniel Vanzo
  • Johann Rohwer +
  • Matti Picus
  • Nathan Goldbaum
  • Peter Hawkins
  • Raghuveer Devulapalli
  • Ralf Gommers
  • Rohit Goswami
  • Sayed Adel
  • Sebastian Berg
  • Stefano Rivera +
  • Thomas A Caswell
  • matoro

Pull requests merged

A total of 42 pull requests were merged for this release.

  • #25130: MAINT: prepare 1.26.x for further development

... (truncated)

Commits
  • b4bf93b Merge pull request #25517 from charris/prepare-1.26.3
  • c8d8c24 REL: Prepare for the NumPy 1.26.3 release
  • 08dac26 Merge pull request #25491 from charris/backport-f2py-toplevel-hard
  • 6b270fb MAINT: Update crackfortran.py and f2py2e.py from main
  • 296dd8b Merge pull request #25490 from charris/backport-f2py-toplevel-easy
  • c84d3d9 Merge pull request #25489 from charris/backport-f2py-backends
  • 44467f2 MAINT: Easy updates of f2py/*.py from main.
  • bf7265c MAINT: Update numpy/f2py/_backends from main.
  • 8184462 Merge pull request #25486 from charris/backport-25321
  • 34f5031 Merge pull request #25485 from charris/backport-25297
  • Additional commits viewable in compare view

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@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Jan 8, 2024
Bumps the python-packages group with 2 updates: [scikit-image](https://github.com/scikit-image/scikit-image) and [numpy](https://github.com/numpy/numpy).


Updates `scikit-image` from 0.19.3 to 0.22.0
- [Release notes](https://github.com/scikit-image/scikit-image/releases)
- [Changelog](https://github.com/scikit-image/scikit-image/blob/main/RELEASE.txt)
- [Commits](scikit-image/scikit-image@v0.19.3...v0.22.0)

Updates `numpy` from 1.26.2 to 1.26.3
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v1.26.2...v1.26.3)

---
updated-dependencies:
- dependency-name: scikit-image
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-packages
- dependency-name: numpy
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-packages
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot force-pushed the dependabot/pip/python-packages-8a8db81005 branch from c8ca7b8 to 972f068 Compare January 22, 2024 13:48
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dependabot bot commented on behalf of github Jan 29, 2024

Dependabot tried to update this pull request, but something went wrong. We're looking into it, but in the meantime you can retry the update by commenting @dependabot rebase.

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dependabot bot commented on behalf of github Feb 12, 2024

Superseded by #196.

@dependabot dependabot bot closed this Feb 12, 2024
@dependabot dependabot bot deleted the dependabot/pip/python-packages-8a8db81005 branch February 12, 2024 14:25
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