Skip to content

Commit

Permalink
cleaned bibliography in whitepaper
Browse files Browse the repository at this point in the history
  • Loading branch information
nevrome committed Mar 19, 2024
1 parent df04cff commit 8044823
Show file tree
Hide file tree
Showing 3 changed files with 13 additions and 10 deletions.
9 changes: 6 additions & 3 deletions docs/main.tex
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,11 @@
\usepackage[
backend=biber,
style=numeric,
sorting=none
sorting=none,
isbn=false,
issn=false,
url=false,
date=year
]{biblatex}
\addbibresource{references.bib}
\definecolor{backcolour}{rgb}{0.95,0.95,0.92}
Expand All @@ -39,7 +43,7 @@
\begin{document}

\title{Xerxes Theoretical Background - Derivations and Statistical Details of the fstats command}
\author{Stephan Schiffels\\Max Planck Institute for Evolutionary Anthropology\\ Leipzig, Germany}
\author{Stephan Schiffels}
\date{Last update: March 2024}
\maketitle

Expand Down Expand Up @@ -163,7 +167,6 @@ \subsection{Bias-correction}
Fortunately, we can \textit{correct} this bias, by using a different estimator for \((a')^2\). Specifically, we can try to simply subtract the term itself from the estimator, using \(a\) instead of \(a'\):

\begin{lstlisting}

In[3]:= Expectation[k^2/n^2 - (k/n (1 - k/n))/n,
k Distributed[BinomialDistribution[n, a]]
2 2 2
Expand Down
14 changes: 7 additions & 7 deletions docs/references.bib
Original file line number Diff line number Diff line change
Expand Up @@ -6,11 +6,12 @@ @ARTICLE{Bhatia2013-qj
volume = 23,
number = 9,
pages = "1514--1521",
month = "1~" # sep,
month = sep,
year = 2013,
url = "http://genome.cshlp.org/cgi/doi/10.1101/gr.154831.113",
file = "All Papers/B/Bhatia et al. 2013 - Bhatia et al. 2013 - Supplemental_Material.pdf;All Papers/B/Bhatia et al. 2013 - Estimating and interpreting FST - The impact of rare variants.pdf;All Papers/B/Bhatia et al. 2013 - Supplemental_Material.docx",
issn = "1088-9051"
issn = "1088-9051",
doi = "10.1101/gr.154831.113"
}

@ARTICLE{Patterson2012-yq,
Expand Down Expand Up @@ -46,14 +47,12 @@ @ARTICLE{Patterson2012-yq
year = 2012,
url = "http://dx.doi.org/10.1534/genetics.112.145037",
file = "All Papers/P/Patterson et al. 2012 - Ancient admixture in human history.pdf",
language = "en",
issn = "0016-6731, 1943-2631",
pmid = "22960212",
doi = "10.1534/genetics.112.145037",
pmc = "PMC3522152"
}


@ARTICLE{Busing1999-ev,
title = "Delete-m Jackknife for Unequal m",
author = "Busing, Frank M T A and Meijer, Erik and Van Der Leeden, Rien",
Expand All @@ -66,11 +65,12 @@ @ARTICLE{Busing1999-ev
volume = 9,
number = 1,
pages = "3--8",
month = "1~" # jan,
month = jan,
year = 1999,
url = "http://link.springer.com/article/10.1023/A:1008800423698",
file = "All Papers/B/Busing et al. 1999 - Delete-m Jackknife for Unequal m.pdf",
issn = "0960-3174"
issn = "0960-3174",
doi = "10.1023/A:1008800423698"
}

@ARTICLE{Peter2016-ml,
Expand Down Expand Up @@ -106,9 +106,9 @@ @ARTICLE{Peter2016-ml
file = "All Papers/P/Peter 2016 - Admixture, Population Structure, and F-Statistics.pdf",
keywords = "admixture; gene flow; phylogenetic network; phylogenetics;
population genetics",
language = "en",
issn = "0016-6731, 1943-2631",
pmid = "26857625",
doi = "10.1534/genetics.115.183913",
pmc = "PMC4905545"
}

Binary file modified docs/xerxes_whitepaper.pdf
Binary file not shown.

0 comments on commit 8044823

Please sign in to comment.