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Add 2021_Saag_EastEuropean #3

Merged
merged 12 commits into from
Apr 8, 2024
Merged

Add 2021_Saag_EastEuropean #3

merged 12 commits into from
Apr 8, 2024

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TCLamnidis
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@TCLamnidis TCLamnidis commented Sep 13, 2023

This package is now ready for review.

The Individual_ID column assumes that each poseidon_ID in the recipe corresponds to a separate individual. If that is not the case, please update the column accordingly.

The following columns have been filled-in with meta information from the community archive package 2021_Saag_EastEuropean-3.2.0:

  • Genetic_Sex
  • Group_Name
  • Alternative_IDs
  • Relation_To
  • Relation_Degree
  • Relation_Type
  • Relation_Note
  • Collection_ID
  • Country
  • Country_ISO
  • Location
  • Site
  • Latitude
  • Longitude
  • Date_Type
  • Date_C14_Labnr
  • Date_C14_Uncal_BP
  • Date_C14_Uncal_BP_Err
  • Date_BC_AD_Start
  • Date_BC_AD_Median
  • Date_BC_AD_Stop
  • Date_Note
  • MT_Haplogroup
  • Y_Haplogroup
  • Source_Tissue
  • Primary_Contact
  • Note
  • Keywords

Additional links:
Package request: poseidon-framework/minotaur-recipes#26
Recipe for the package: https://github.com/poseidon-framework/minotaur-recipes/tree/main/packages/2021_Saag_EastEuropean

@TCLamnidis TCLamnidis marked this pull request as draft March 26, 2024 12:20
@TCLamnidis
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The poseidon package for this recipe needs re-creation to meet the MNT archive standard. Currently working on it.

@TCLamnidis TCLamnidis requested review from nevrome and stschiff April 4, 2024 13:22
@TCLamnidis TCLamnidis marked this pull request as ready for review April 4, 2024 13:22
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@stschiff stschiff left a comment

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Looks great! I like the extensive note in Contamination_Note. Very informative.

2021_Saag_EastEuropean/POSEIDON.yml Outdated Show resolved Hide resolved
@TCLamnidis TCLamnidis merged commit 4e9ea9a into main Apr 8, 2024
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@TCLamnidis TCLamnidis deleted the 2021_Saag_EastEuropean branch April 8, 2024 11:15
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3 participants