Bump pre-commit versions + add isort

populationgenomics · Jan 4, 2024 · 41ec5be · 41ec5be
1 parent c985b75
commit 41ec5be
Showing 1 changed file with 20 additions and 6 deletions.
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -2,7 +2,7 @@ default_language_version:
   python: python3.10
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.2.0
+    rev: v4.5.0
     hooks:
       - id: check-yaml
         exclude: '\.*conda/.*'
@@ -16,24 +16,38 @@ repos:
       - id: check-added-large-files
 
   - repo: https://github.com/igorshubovych/markdownlint-cli
-    rev: v0.31.1
+    rev: v0.38.0
     hooks:
       - id: markdownlint
-        args: ["--config", ".markdownlint.json"]
+
+  - repo: https://github.com/pycqa/isort
+    rev: 5.13.2
+    hooks:
+      - id: isort
+        name: isort (python)
 
   - repo: https://github.com/ambv/black
-    rev: "22.3.0"
+    rev: 23.12.1
     hooks:
       - id: black
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
     # Ruff version.
-    rev: v0.1.0
+    rev: v0.1.11
     hooks:
       - id: ruff
 
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: "v0.960"
+    rev: v1.8.0
     hooks:
       - id: mypy
+        args:
+          [
+            --pretty,
+            --show-error-codes,
+            --no-strict-optional,
+            --ignore-missing-imports,
+            --install-types,
+            --non-interactive,
+          ]
         additional_dependencies: [types-PyYAML==6.0.4, types-toml]