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plantgenomicslab

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  1. ALLHiC_Pipeline ALLHiC_Pipeline Public

    Pipeline for Straightforward Usage of ALLHic

    Python 5

  2. BCH709 BCH709 Public

    Introduction to Bioinformatics

    Python 2 4

  3. plantgenomicslab.github.io plantgenomicslab.github.io Public

    SCSS 1

  4. bio_scripts bio_scripts Public

    Forked from shenwei356/bio_scripts

    Practical, reusable scripts for bioinformatics

    Perl

  5. REPET-slurm REPET-slurm Public

    Forked from stajichlab/REPET-slurm

    SLURM-ready bash scripts to run the complete REPET pipeline

    Shell

  6. ProtExcluder ProtExcluder Public

    Forked from NBISweden/ProtExcluder

    A modified version of ProtExcluder for building conda package

    Perl

Repositories

Showing 10 of 44 repositories
  • BCH709 Public

    Introduction to Bioinformatics

    plantgenomicslab/BCH709’s past year of commit activity
    Python 2 4 0 0 Updated Dec 9, 2024
  • ECHO Public
    plantgenomicslab/ECHO’s past year of commit activity
    Python 0 0 0 0 Updated Dec 6, 2024
  • Hyper-editing Public Forked from hagitpt/Hyper-editing

    Hyper-editing

    plantgenomicslab/Hyper-editing’s past year of commit activity
    Perl 0 MIT 3 0 0 Updated Sep 18, 2024
  • hisat2 Public Forked from DaehwanKimLab/hisat2

    Graph-based alignment (Hierarchical Graph FM index)

    plantgenomicslab/hisat2’s past year of commit activity
    C++ 0 GPL-3.0 121 0 0 Updated Aug 7, 2024
  • PGRP_Snakemake Public

    PGRP_Snakemake

    plantgenomicslab/PGRP_Snakemake’s past year of commit activity
    Python 0 0 0 0 Updated May 23, 2024
  • PsiCLASS Public Forked from splicebox/PsiCLASS

    Simultaneous multi-sample transcript assembler for RNA-seq data

    plantgenomicslab/PsiCLASS’s past year of commit activity
    C 0 5 0 0 Updated May 2, 2024
  • HMMerMe Public
    plantgenomicslab/HMMerMe’s past year of commit activity
    Python 0 1 0 0 Updated Apr 11, 2024
  • geta Public Forked from chenlianfu/geta
    plantgenomicslab/geta’s past year of commit activity
    Perl 0 GPL-3.0 25 0 0 Updated Feb 20, 2024
  • SbicolorProject Public Forked from asianjoelshin/SbicolorProject
    plantgenomicslab/SbicolorProject’s past year of commit activity
    Python 0 1 0 0 Updated Nov 6, 2023
  • RNASeq_CSSI Public

    RNASeq_CSSI

    plantgenomicslab/RNASeq_CSSI’s past year of commit activity
    Python 0 4 0 0 Updated Feb 25, 2023
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