Fix/customdumpsoftwareversions #51
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apetkau
commented
Mar 20, 2024
| @@ -23,7 +23,7 @@ process GZIP_FILES { | |||
| gzip -c ${file_in} > ${output_name} | |||
| cat <<-END_VERSIONS > versions.yml | |||
| "${task.process}": | |||
| gzip: \$(echo \$(gzip --version 2>&1) | sed 's/^.*coreutils) //; s/ .*\$//') | |||
| gzip: \$(echo \$(gzip --help 2>&1 | head -n 1 ) | sed -e 's/ (.*//') | |||
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This version of gzip in the container running this process does not have a --version flag. The closest is --help, which gives:
BusyBox v1.22.1 (2014-05-23 01:24:27 UTC) multi-call binary.
Usage: gzip [-cfd] [FILE]...
Compress FILEs (or stdin)
-d Decompress
-c Write to stdout
-f Force
This PR extracts the top line and uses that for the version (specifically uses BusyBox v1.22.1). I'm including BusyBox in the version since I believe these are custom versions of software (like gzip) that are smaller/scaled down: https://www.busybox.net/about.html
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This fixes an error when generating the software versions file due to an invalid command for extracting the version of gzip.