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Releases: phac-nml/irida-plugin-amr-detection

0.3.0

09 Mar 15:43
0.3.0
a581cc2
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  • Updates staramr to version 0.9.1.
  • Updates Shovill to version 1.1.0+galaxy1.
  • Updates RGI to version 5.2.1.
    • Specific RGI databases can be installed in Galaxy and selected through the pipeline.
  • Moved selection of PointFinder organism to a dropdown list when starting pipeline (PR#20)

0.2.0

31 Mar 16:17
0.2.0
a69ae8b
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  • Updated writing of metadata to be compatible with IRIDA 21.01 update.
    • This means the plugin now requires IRIDA 21.01+.
  • Updated staramr version to 0.7.2.
    • The plugin will now save the additional fields provided by the newer staramr version in the metadata table.
  • Updated RGI version to 5.1.1.
  • Updated Shovill to version 1.1.0.
  • Fixed bug where empty RGI results would lead to metadata not being written (#8)

Release 0.1.0

26 Apr 18:06
0.1.0
a489ebb
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  • Initial release of AMR Detection pipeline.