Merge pull request #59 from phac-nml/allele

Allele

ectyper/__init__.py

@@ -1 +1 @@
-__version__ = "0.5.3"
+__version__ = "0.5.4"

recipe/meta.yaml

@@ -21,19 +21,18 @@ build:
 requirements:
     build:
         - python >=3.5
-        - skip: True # [not py35]
 
     run:
         - python >=3.5
         - pytest >=3.5
-        - pandas >=0.23
-        - samtools >=1.7
-        - bowtie2 >=2.3
-        - mash >=2.0
-        - bcftools >=1.7
-        - biopython >=1.69
-        - blast >=2.2.31
-        - seqtk >=1.2
+        - pandas 0.23.1.*
+        - samtools 1.8.*
+        - bowtie2 2.3.4.1.*
+        - mash 2.0.*
+        - bcftools 1.8.*
+        - biopython 1.70.*
+        - blast 2.7.1.*
+        - seqtk 1.2.*
 
 test:
     import:

recipe/meta_bioconda.yaml

@@ -0,0 +1,44 @@
+{% set version = "0.5.4" %}
+
+about:
+    license: Apache 2
+    summary: ECtyper is a python program for serotyping E. coli genomes
+    author: Chad Laing, Camille La Rose, Sam Sung
+    home: https://github.com/phac-nml/ecoli_serotyping
+
+package:
+    name: ectyper
+    version: {{ version }}
+
+source:
+    url: https://github.com/phac-nml/ecoli_serotyping/archive/v{{ version }}.tar.gz
+    sha256: 6c721eab0b16e20c757a3476014fb4c3270b69509013b18fe882693fee0a73d7
+
+build:
+    number: 2
+    script: python setup.py install
+
+requirements:
+    build:
+       - python >=3.5
+
+    run:
+       - python >=3.5
+       - pytest >=3.5
+       - pandas 0.23.1.*
+       - samtools 1.8.*
+       - bowtie2 2.3.4.1.*
+       - mash 2.0.*
+       - bcftools 1.8.*
+       - biopython 1.70.*
+       - blast 2.7.1.*
+       - seqtk 1.2.*
+
+test:
+    import:
+       - ectyper
+    test:
+       - "ectyper --help"
+
+
+