Code

Add new dunder methods and attributes#27

Code

Merged

Adamtaranto merged 15 commits intomainoxli-bio/oxli:mainfrom dev_pymethodsoxli-bio/oxli:dev_pymethodsCopy head branch name to clipboardSep 18, 2024

+251-40

Commits

Commits on Sep 14, 2024

• Add toml package as testing dependency.

  Adamtaranto

  committed
  9d6c130

• Add version attribute to new KmerCountTable instances.

  Adamtaranto

  committed
  50f1ba9

• Test version attribute.

  Adamtaranto

  committed
  efea9a8

• Track total bases consumed with attr consumed

  Adamtaranto

  committed
  94c9126

• Add tests for consumed attr

  Adamtaranto

  committed
  9b943df

• Add sum_counts attr to get total counts in table.

  Adamtaranto

  committed
  a7c4bf0

• Add tests for sum_counts attr

  Adamtaranto

  committed
  824a5b9

• Add __len__ method to get total unique kmer count.

  Adamtaranto

  committed
  8ba5166

• Add tests for __len__ method.

  Adamtaranto

  committed
  06e148b

• Add __getitem__ and __setitem__ methods

  Adamtaranto

  committed
  c697fa0

• Tests for __getitem__ and __setitem__ dunder methods.

  Adamtaranto

  committed
  5163e5f

• Make KmerCountTable iterable

  Adamtaranto

  committed
  aeef6e7

• Add tests for __iter__

  Adamtaranto

  committed
  9d95e78

Commits on Sep 18, 2024

• MRG: some suggested changes for new dunder methods (#34)

  Show description for 854dc9d
  

  ctb

  and

  dependabot[bot]

  authored
  854dc9d

• Merge branch 'main' into dev_pymethods

  Adamtaranto

  authored
  6db4f85