Merge pull request #40 from oxfordmmm/minor-call-edge-case-none-filter

fix: check for None on filter before `in` check
oxfordmmm · Jul 24, 2024 · 6285fea · 6285fea
2 parents e951adc + ba6e993
commit 6285fea
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/gumpy/variantfile.py b/gumpy/variantfile.py
@@ -566,7 +566,7 @@ def __find_calls(self):
                 not record.is_filter_pass
             ):
                 # We only want to allow these through if the filter fail contains MIN_FRS
-                if "MIN_FRS" in record.filter:
+                if record.filter is not None and "MIN_FRS" in record.filter:
                     # Allow MIN_FRS
                     variant = record.ref
                     variant_type = "ref"