introduce multivariate cdf / quantiles (#447) #1600
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| name: tests | |
| on: | |
| schedule: | |
| - cron: 00 00 * * 1 | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| fast-tests: | |
| name: Fast tests Python ${{ matrix.python-version }} ${{ matrix.jax-version }} | |
| runs-on: ubuntu-latest | |
| # allow tests using the latest JAX to fail | |
| continue-on-error: ${{ matrix.jax-version == 'jax-latest' }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.9'] | |
| jax-version: [jax-default, jax-latest] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install tox | |
| - name: Setup environment | |
| run: | | |
| tox -e py${{ matrix.python-version }}-${{ matrix.jax-version }} --notest -v | |
| - name: Run tests | |
| run: | | |
| tox -e py${{ matrix.python-version }}-${{ matrix.jax-version }} --skip-pkg-install -- -m fast --memray -n auto -vv | |
| gpu-tests: | |
| name: Fast GPU tests Python 3.8 on ubuntu-20.04 | |
| runs-on: [self-hosted, ott-gpu] | |
| container: | |
| image: docker://michalk8/cuda:11.3.0-ubuntu20.04 | |
| options: --gpus="device=12" | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install dependencies | |
| # `jax[cuda]<0.4` because of Docker issues: https://github.com/google/jax/issues/13758 | |
| # `chex<0.1.7` because it requires `jax>=0.4.6` | |
| # `flax<0.6.5` because it requires `jax>=0.4.2`, --no-deps because of `orbax` | |
| run: | | |
| python3 -m pip install --upgrade pip | |
| python3 -m pip install -e".[test]" | |
| python3 -m pip install "orbax-checkpoint" "orbax-export" "chex<0.1.7" | |
| python3 -m pip install --no-deps "flax<0.6.5" | |
| python3 -m pip install "jax[cuda]<0.4" -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html | |
| - name: Nvidia SMI | |
| run: | | |
| nvidia-smi | |
| - name: Run tests | |
| run: | | |
| python3 -m pytest -m "fast and not cpu" --memray --durations 10 -vv | |
| tests: | |
| name: Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.8', '3.10', '3.11'] | |
| os: [ubuntu-latest] | |
| include: | |
| - python-version: '3.9' | |
| os: macos-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install tox | |
| - name: Setup environment | |
| run: | | |
| tox -e py${{ matrix.python-version }} --notest -v | |
| - name: Run tests | |
| run: | | |
| tox -e py${{ matrix.python-version }} --skip-pkg-install | |
| env: | |
| PYTEST_ADDOPTS: --memray -vv | |
| - name: Upload coverage | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| files: ./coverage.xml | |
| flags: tests-${{ matrix.os }}-${{ matrix.python-version }} | |
| name: unittests | |
| env_vars: OS,PYTHON | |
| fail_ci_if_error: false | |
| verbose: true |