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    34 repositories

    • tsaftarislab.github.io

      Public
      Github Pages for vios group, forked from mmistakes/minimal-mistakes
      SCSS
      •44k•1•0•0•Updated Nov 28, 2024Nov 28, 2024

    • gmt-leaf-ins-seg

      Public
      Official repository for GMT: Guided Mask Transformer for Leaf Instance Segmentation (https://arxiv.org/abs/2406.17109), accepted at IEEE/CVF Winter Conference on Applications of Computer Vision (WACV) 2025
      MIT License
      •0•0•0•0•Updated Nov 25, 2024Nov 25, 2024

    • CMRxRECON_Challenge_EDIPO

      Public
      Inference code for EDIPO group participating in CMRxRECON challenge by MICCAI
      Python
      •
      MIT License
      •0•5•0•2•Updated Oct 16, 2024Oct 16, 2024

    • BMFT

      Public
      Python
      •0•1•0•0•Updated Jul 25, 2024Jul 25, 2024

    • MRI_Active_Sampling

      Public
      Python
      •0•0•0•0•Updated Jun 30, 2024Jun 30, 2024

    • Erase-to-Enhance-MRI-Recon-Unlearning

      Public
      Machine Unlearning on MRI Reconstruction Task
      Jupyter Notebook
      •0•0•0•0•Updated Jun 18, 2024Jun 18, 2024

    • ISBI-2024-DiMEDIA-MONAI-Tutorial

      Public
      Jupyter Notebook
      •
      MIT License
      •1•1•0•0•Updated May 27, 2024May 27, 2024

    • Inference_Denoising_MRI_Recon

      Public
      Office code for "Inference Stage Denoising for Undersampled MRI Reconstruction"
      Python
      •1•3•0•0•Updated Feb 15, 2024Feb 15, 2024

    • ReconstructionFairness

      Public
      Code for 'Unveiling Fairness Biases in Deep Learning-Based Brain MRI Reconstruction' in FAIMI 2023 of MICCAI
      Python
      •0•0•0•0•Updated Sep 25, 2023Sep 25, 2023

    • vMFNet-Journal

      Public
      Python
      •1•2•1•0•Updated Aug 10, 2023Aug 10, 2023

    • Diff-SCM

      Public
      Code for Diff-SCM paper
      Python
      •
      Apache License 2.0
      •11•94•0•0•Updated Jun 7, 2023Jun 7, 2023

    • DiffAN

      Public
      Diffusion Models for Causal Discovery
      Python
      •
      GNU General Public License v3.0
      •13•82•2•0•Updated Mar 17, 2023Mar 17, 2023

    • disentanglement_tutorial

      Public
      This repository summarizes the material gathered for the tutorial on learning disentangled representations in the imaging domain, and serves as a roadmap for the disentanglement aficionados.
      disentanglementdisentangled-representationscomputer-vision-applicationcontent-style-disentanglementmedical-imaging-application
      8•59•0•0•Updated Sep 16, 2022Sep 16, 2022

    • vMFNet

      Public
      vMFNet: Compositionality Meets Domain-generalised Segmentation
      Python
      •
      MIT License
      •3•15•3•0•Updated Aug 5, 2022Aug 5, 2022

    • adversarial-test-time-training

      Public
      HTML
      •
      Apache License 2.0
      •0•0•0•0•Updated Dec 23, 2021Dec 23, 2021

    • DGNet

      Public
      Semi-supervised Meta-learning with Disentanglement for Domain-generalised Medical Image Segmentation
      Python
      •7•35•0•0•Updated Nov 2, 2021Nov 2, 2021

    • CSDisentanglement_Metrics_Library

      Public
      This repository constists of the implementations of the Distance Correlation (DC) and Information Over Bias (IOB) metrics proposed in [link]. The two metrics can be used to assess the level of disentanglement between spatial content and vector style representations. Both metrics are ready to use with PyTorch and TensorFlow implementations.
      Python
      •
      MIT License
      •2•22•2•0•Updated Oct 16, 2021Oct 16, 2021

    • multiscale-pyag

      Public
      HTML
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 9, 2021Oct 9, 2021

    • cardiac_dataset_trasformer

      Public
      This repository has been created to improve the young researchers' experience when using cardiac data for any medical imaging application. It consists of transformers that reorganize a DICOM-based dataset into traditional image dataset structure for better dataloader exploitation.
      Python
      •
      MIT License
      •1•10•1•0•Updated Jul 20, 2021Jul 20, 2021

    • DAA-GAN

      Public
      Controllable cardiac synthesis via disentangled anatomy arithmetic
      Python
      •2•5•0•0•Updated Jul 4, 2021Jul 4, 2021

    • multiscale-adversarial-attention-gates

      Public
      Project page of the paper: "Learning to Segment from Scribbles using Multi-scale Adversarial Attention Gates", by Gabriele Valvano, Andrea Leo, Sotirios A. Tsaftaris (2021) IEEE TMI
      HTML
      •
      Apache License 2.0
      •1•1•0•0•Updated Apr 22, 2021Apr 22, 2021

    • multimodal_segmentation

      Public
      Code for Disentangle Align and Fuse for Multimodal and Zero-shot Image Segmentation
      Python
      •
      MIT License
      •4•16•0•0•Updated Sep 26, 2020Sep 26, 2020

    • inside

      Public
      INSIDE: Steering Spatial Attention with Non-Imaging Information in CNNs
      Python
      •
      Apache License 2.0
      •2•0•0•0•Updated Sep 25, 2020Sep 25, 2020

    • RA_FA_Cardiac

      Public
      Python
      •3•0•0•0•Updated Sep 18, 2020Sep 18, 2020

    • BrainAgeing

      Public
      This is the project about simulating the ageing brain.
      Python
      •9•5•0•0•Updated Sep 9, 2020Sep 9, 2020

    • MFU-Net

      Public
      MFU-Net
      Python
      •4•1•0•0•Updated Sep 1, 2020Sep 1, 2020

    • APDNet

      Public
      APD-Net
      Python
      •1•0•0•0•Updated Aug 27, 2020Aug 27, 2020

    • pseudo-healthy-synthesis

      Public
      Python
      •4•0•0•0•Updated Jul 1, 2020Jul 1, 2020

    • anatomy_modality_decomposition

      Public
      SDNet Keras implementation
      Python
      •5•0•0•0•Updated May 22, 2020May 22, 2020

    • Leaf-Counting

      Public
      Code for the paper Leveraging multiple datasets for deep leaf counting.
      Python
      •
      Apache License 2.0
      •5•0•0•0•Updated Mar 6, 2020Mar 6, 2020