Skip to content

@hawkins-lab hawkins-lab

Change the repository type filter

All

    Repositories list

    3 repositories

    • STARR_Seq_to_MPRAnalyze_input

      Public
      Starr Seq to MPRAnalyze input is an easy way to convert zipped fastq to csv files as an input for MPRAnalyze. I adopted and repurposed most of the processing scripts from Arpit Mishra (post-doc in the Hawkins lab).
      Python
      •1•0•0•0•Updated Jun 3, 2021Jun 3, 2021

    • rnaseq_tutorial

      Public
      Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
      R
      •
      Other
      •617•0•0•0•Updated Nov 1, 2018Nov 1, 2018

    • Sequencing_Analysis

      Public
      Scripts and Pipeline for Sequencing Analysis
      Shell
      •0•0•0•0•Updated Jun 29, 2017Jun 29, 2017