cambiotraining

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58 repositories

coding-for-research
Public
Lua
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Other
•0•0•0•0•Updated Feb 5, 2025Feb 5, 2025
bacterial-genomics
Public
Course materials for "Working with Bacterial Genomes"
Python
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Other
•2•0•8•0•Updated Feb 4, 2025Feb 4, 2025
quarto-course-template
Public
Lua
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Other
•2•2•10•0•Updated Jan 28, 2025Jan 28, 2025
metagenomics
Public
Course materials for "Introduction to Metagenomics"
Lua
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Other
•2•1•3•0•Updated Nov 7, 2024Nov 7, 2024
corestats
Public
These materials support the Core statistics sessions, run through the Bioinformatics Training Facility at the University of Cambridge.
statistics python-programming r-programming
Python
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MIT License
•6•4•18•0•Updated Oct 25, 2024Oct 25, 2024
software-installation
Public
Software installation instructions
Lua
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Other
•0•0•2•0•Updated Oct 24, 2024Oct 24, 2024
hpc-intro
Public
Practical course on running jobs on a HPC
Shell
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Other
•14•15•14•0•Updated Oct 7, 2024Oct 7, 2024
unix-shell
Public
Materials for "Introduction to Unix Shell" course.
Lua
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Other
•7•3•11•0•Updated Oct 6, 2024Oct 6, 2024
hpc-intro-sanger
Public
Introduction to HPC for Sanger DTP
Lua
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Other
•1•2•2•0•Updated Oct 3, 2024Oct 3, 2024
stats-glm
Public
statistics python-programming r-programming generalised-linear-models
HTML
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Other
•1•1•3•0•Updated Oct 1, 2024Oct 1, 2024
stats-mva
Public
Materials supporting the Multivariate analysis sessions
statistics python-programming pca kmeans-clustering r-programming hierarchical-clustering multivariate-analysis
Python
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Other
•1•1•0•0•Updated Sep 27, 2024Sep 27, 2024
bioinformatics-software-pipelines
Public
Course materials for "Managing Bioinformatics Software and Pipelines"
Lua
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Other
•3•1•10•0•Updated Sep 25, 2024Sep 25, 2024
stats-bbs-linear-models
Public
Practical materials for the NST Part II BBS Bioinformatics course
statistics linear-regression undergraduate
Python
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Other
•1•1•0•0•Updated Sep 20, 2024Sep 20, 2024
stats-resampling
Public
statistics python-programming resampling r-programming advanced-stats
Python
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Other
•0•0•0•0•Updated Sep 20, 2024Sep 20, 2024
visual-data-communication
Public
A course to learn the basics on communicating data effectively, using visualisation.
data-visualisation r-programming data-communication
Lua
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Other
•2•2•3•0•Updated Sep 20, 2024Sep 20, 2024
stats-mixed-effects-models
Public
statistics linear-mixed-effects
Lua
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Other
•2•2•6•0•Updated Sep 19, 2024Sep 19, 2024
sars-cov-2-genomics
Public
Course materials for an introduction to SARS-CoV-2 sequencing data analysis
Shell
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Other
•7•14•16•0•Updated Aug 15, 2024Aug 15, 2024
proteomics
Public
Course materials for "Analysis of expression Proteomics data in R"
R
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Other
•5•0•0•0•Updated Aug 14, 2024Aug 14, 2024
chipseq
Public
ChIP-seq and ATAC-seq analysis
R
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Other
•7•12•11•0•Updated Jun 17, 2024Jun 17, 2024
stats-week
Public
Course materials for Statistical analysis and experimental design masterclass.
statistics experimental-design
Python
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Creative Commons Attribution 4.0 International
•2•1•0•0•Updated Apr 16, 2024Apr 16, 2024
awd-pathogen-bioinformatics
Public
Materials for "Introduction to Cholera Genomics" course
Shell
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Other
•1•2•9•0•Updated Jan 23, 2024Jan 23, 2024
Dataskills-smallbytes
Public
Repo for short courses & trainer support
HTML
•0•0•0•0•Updated Nov 28, 2023Nov 28, 2023
reproducibility-training
Public
Training material for Reproducible Research in R course
HTML
•10•0•7•1•Updated Nov 15, 2023Nov 15, 2023
python-nerc
Public
Jupyter Notebook
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Other
•0•0•0•0•Updated Nov 1, 2023Nov 1, 2023
bulk-rnaseq
Public
HTML
•14•1•0•0•Updated Oct 24, 2023Oct 24, 2023
edu-visual-accessibility
Public
Lua
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Other
•0•0•1•0•Updated Oct 4, 2023Oct 4, 2023
intro-r
Public
Website for this course
HTML
•7•2•1•0•Updated Oct 3, 2023Oct 3, 2023
experimental-design
Public
Python
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Other
•1•0•3•0•Updated Aug 2, 2023Aug 2, 2023
reproducibility-without-fuss
Public
Supporting information for one of the Reproducibility courses we offer
HTML
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MIT License
•2•0•4•0•Updated Jul 24, 2023Jul 24, 2023
dataviz-figdesign
Public
Introduction to Figure Design and Data Visualisation with ggplot2
HTML
•5•1•2•0•Updated Jul 20, 2023Jul 20, 2023