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    36 repositories

    • WildlifeMapper

      Public
      WildlifeMapper: Aerial Image Analysis for Multi-Species Detection and Identification
      Python
      •
      MIT License
      •0•11•1•0•Updated Dec 2, 2024Dec 2, 2024

    • TrajectoryDino

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Oct 19, 2024Oct 19, 2024

    • MedSAM_CTsegmentation

      Public
      CT segmentation model with SAM as foundational model backbone. Prepares 7 classes, including ventricles and subarachnoid regions.
      Jupyter Notebook
      •
      Apache License 2.0
      •0•2•0•0•Updated Oct 9, 2024Oct 9, 2024

    • ucsb-vrl.github.io

      Public
      Bisque2 category page
      HTML
      •0•0•0•0•Updated May 21, 2024May 21, 2024

    • bisqueUCSB

      Public
      An ML Platform for storing, analyzing, and visualizing your data all in the browser.
      pythondockerkubernetesthreejsmachine-learningbioinformaticscomputer-visiondeep-learningimage-processingmedical-imaging
      Jupyter Notebook
      •
      Other
      •10•35•1•0•Updated May 21, 2024May 21, 2024

    • MethaneMapper-Spectral-Absorption-aware-Hyperspectral-Transformer-for-Methane-Detection

      Public
      MethaneMapper: Spectral Absorption aware Hyperspectral Transformer for Methane Detection
      Python
      •
      Other
      •8•61•1•1•Updated Feb 16, 2024Feb 16, 2024

    • bisque-modules

      Public
      Official Repo for Modules Integrated into BisQue Production
      Jupyter Notebook
      •4•1•0•4•Updated Jul 17, 2023Jul 17, 2023

    • StressVision

      Public
      StressVision: Non-Invasive Stress Detection from Thermal Images
      Python
      •
      MIT License
      •0•4•0•0•Updated Jul 16, 2023Jul 16, 2023

    • bisque-docs

      Public
      Official Documentation of BisQue
      1•0•0•0•Updated Jun 26, 2023Jun 26, 2023

    • ReeBundle

      Public
      Implementation and Tutorials for robust Reeb graph model of white matter fibers.
      Jupyter Notebook
      •1•2•0•0•Updated May 15, 2023May 15, 2023

    • bisque-modules-1

      Public archive
      Official Repo for Modules Integrated into BisQue Production
      Jupyter Notebook
      •4•0•0•0•Updated May 7, 2023May 7, 2023

    • StressNet-Detecting-stress-from-thermal-videos

      Public
      StressNet: Detecting Stress in Thermal Videos. StressNet introduces a fast and novel algorithm of obtaining physiological signals and classify stress states from thermal videos.
      stress-detectorthermal-videosisti-detectoristi-signal-predictor
      Python
      •
      MIT License
      •5•20•0•0•Updated Apr 20, 2023Apr 20, 2023

    • Q-RBSA

      Public
      High-Resolution 3D EBSD Map Generation Using An Efficient Quaternion Transformer Network
      Python
      •1•3•0•0•Updated Apr 15, 2023Apr 15, 2023

    • GTNet

      Public
      GTNet:Guided Transformer Network for Detecting Human-Object Interactions
      Python
      •2•14•0•0•Updated Apr 4, 2023Apr 4, 2023

    • Time-lapse3DCellAnalysis

      Public
      Python
      •2•1•1•0•Updated Mar 23, 2023Mar 23, 2023

    • EBSD-Superresolution

      Public
      A Physics-based EBSD Super-resolution
      Python
      •0•2•0•0•Updated Feb 14, 2023Feb 14, 2023

    • BQ_module_generator

      Public
      Command Line Interface to automate module development for Bisque web application
      Python
      •3•3•0•1•Updated Jan 30, 2023Jan 30, 2023

    • NPH_Segmentation

      Public
      Python
      •1•0•0•0•Updated Jul 21, 2022Jul 21, 2022

    • NPH_Prediction

      Public
      Code to accompany NPH Prediction paper.
      Python
      •
      Other
      •8•7•2•3•Updated Jun 21, 2022Jun 21, 2022

    • Ciona_AZ

      Public
      Code to accompany paper, Automatic Detection and Neurotransmitter Prediction of Synapses in Electron Microscopy.
      Python
      •0•0•0•0•Updated Jan 21, 2022Jan 21, 2022

    • ReebGraph

      Public
      Implementation of the Reeb Graph model for neuronal fibers
      Python
      •2•2•0•0•Updated Aug 17, 2021Aug 17, 2021

    • ucsb_ctc

      Public
      Code submitted for Cell Segmentation and Tracking challenge in ISBI 2020.
      Python
      •2•0•0•0•Updated Aug 17, 2021Aug 17, 2021

    • bisque

      Public
      BisQue (Bio-Image Semantic Query User Environment) stable repository
      JavaScript
      •
      Other
      •3•3•0•1•Updated Feb 7, 2020Feb 7, 2020

    • UpLoadHCPfiles

      Public
      Upload HCP T1w images to Bisque
      Python
      •1•0•0•0•Updated Jul 31, 2019Jul 31, 2019

    • 3DPavementCell

      Public
      Python
      •
      MIT License
      •3•3•0•0•Updated Jul 11, 2019Jul 11, 2019

    • Purdue3DCell

      Public
      Python
      •
      MIT License
      •1•1•0•0•Updated Jul 11, 2019Jul 11, 2019

    • ABCD-MICCAI2019

      Public
      This repository contains the source code of UCSBVRL who participating in the ABCD MICCAI 2019 Challenge.
      Python
      •
      MIT License
      •1•0•0•0•Updated Apr 26, 2019Apr 26, 2019

    • ACAM_Demo

      Public
      Real-time Action detection demo for the work Actor Conditioned Attention Maps. This repo includes a complete pipeline for person detection/tracking and analyzing their actions in real-time.
      Python
      •
      MIT License
      •37•1•0•0•Updated Apr 23, 2019Apr 23, 2019

    • multimodal_vrl_camera_net

      Public
      Multimodal camera network
      Python
      •1•0•0•0•Updated Nov 20, 2018Nov 20, 2018

    • neurodocker

      Public
      Generate custom Docker and Singularity images, and minimize existing containers
      Python
      •
      Apache License 2.0
      •97•0•0•0•Updated Oct 12, 2018Oct 12, 2018