Repositories list

• AI_MARRVEL

  Public
  AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis

  Python

  •

  GNU General Public License v3.0

  •6•9•2•0•Updated Feb 7, 2025Feb 7, 2025

• MARRVEL2

  Public
  TypeScript

  •1•0•0•0•Updated Jan 9, 2025Jan 9, 2025

• rgr_modelMatcher

  Public
  Researcher Gene Registry. Originally developed for the Canadian Rare Disease Models & Mechanisms Network

  Java

  •

  Apache License 2.0

  •8•0•0•0•Updated Nov 21, 2024Nov 21, 2024

• ReSort_manuscript

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

• AI_Group_Discussion

  Public
  0•1•0•0•Updated Sep 4, 2024Sep 4, 2024

• Mouse-AAV-OSN

  Public
  Computational analysis for "Comparative Analysis of AAV Serotypes for the Transduction of Olfactory Sensory Neurons" by Belfort and Jia et al. 2024

  Jupyter Notebook

  •

  MIT License

  •0•1•0•0•Updated Aug 30, 2024Aug 30, 2024

• OverlapPlots

  Public
  Overlap plots bioconductor package for gene length analysis.

  R

  •

  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Jun 3, 2024Jun 3, 2024

• rgr

  Public
  Researcher Gene Registry. Originally developed for the Canadian Rare Disease Models & Mechanisms Network

  Java

  •

  Apache License 2.0

  •8•0•0•0•Updated Nov 17, 2023Nov 17, 2023

• RESORT

  Public
  An approach to enhance reference-based spatial deconvolution methods

  Python

  •0•0•0•0•Updated Sep 5, 2023Sep 5, 2023

• SPA-STOCSY

  Public
  HTML

  •0•1•0•0•Updated Jul 30, 2023Jul 30, 2023

• SPA_STOCSY

  Public
  HTML

  •0•0•0•0•Updated Jul 26, 2023Jul 26, 2023

• NMRQNet

  Public
  HTML

  •0•4•0•0•Updated Apr 13, 2023Apr 13, 2023

• power_curves_git

  Public
  Power Curves User Guide and Example Data

  R

  •0•0•0•0•Updated Nov 9, 2022Nov 9, 2022

• MIST_source_code

  Public
  Code for MIST manuscript revision

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 28, 2022Oct 28, 2022

• ClinPhen_for_MARRVELAI

  Public
  Temporary repository for ClinPhen with non-stringent option.

  Python

  •

  Other

  •0•0•0•0•Updated Sep 19, 2022Sep 19, 2022

• MIST_manuscript

  Public
  Source code to reproduce the figures in MIST manuscript

  Jupyter Notebook

  •0•0•0•0•Updated Apr 28, 2022Apr 28, 2022

• TraceQC

  Public
  HTML

  •

  Other

  •1•6•0•0•Updated Apr 17, 2022Apr 17, 2022

• TraceQC-manuscript

  Public
  R

  •0•0•0•0•Updated Sep 15, 2021Sep 15, 2021

• LSDgenes

  Public
  LSD genes burden analysis

  Jupyter Notebook

  •0•0•0•0•Updated Feb 13, 2021Feb 13, 2021

• paper_deconvBenchmark

  Public
  Including source code and raw data of the deconvolution benchmark paper.

  R

  •

  MIT License

  •3•8•1•0•Updated Feb 8, 2021Feb 8, 2021

• ER_positive_breast_cancer-manuscirpt

  Public
  R

  •0•0•0•0•Updated Oct 26, 2020Oct 26, 2020

• CRISPR_bone_metastasis-manuscript

  Public
  R

  •0•0•0•0•Updated Oct 26, 2020Oct 26, 2020

• TraceQC-Supplementary

  Public
  HTML

  •0•0•0•0•Updated Jun 6, 2020Jun 6, 2020

• crossSpecies_RNAseq

  Public
  Python

  •0•0•0•0•Updated Feb 12, 2020Feb 12, 2020

• mecp2sca1

  Public
  Pipeline for analyzing RNA-seq data from GEO for mecp2 and sca1

  Python

  •0•0•0•0•Updated Nov 14, 2019Nov 14, 2019

• PRIME

  Public
  R

  •2•1•0•0•Updated Apr 12, 2019Apr 12, 2019

• CB2Bench

  Public
  HTML

  •0•0•0•0•Updated Jan 18, 2019Jan 18, 2019

• CRISPRcloud-standalone

  Public
  R

  •0•2•1•0•Updated May 11, 2017May 11, 2017