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@Genomon-Project Genomon Project

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    23 repositories

    • GenomonSV

      Public
      structure detection program
      Python
      •
      GNU General Public License v3.0
      •11•17•11•0•Updated Nov 20, 2024Nov 20, 2024

    • GenomonMutationFilter

      Public
      Python
      •
      GNU General Public License v3.0
      •4•1•0•0•Updated Sep 27, 2024Sep 27, 2024

    • genomon-docs

      Public
      Document of Genomon pipeline
      Python
      •
      GNU General Public License v3.0
      •2•1•0•1•Updated Apr 4, 2024Apr 4, 2024

    • GenomonPages

      Public
      Genomon Page
      HTML
      •0•0•0•0•Updated Oct 3, 2023Oct 3, 2023

    • paplot-doc

      Public
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Jul 6, 2023Jul 6, 2023

    • GenomonPortal

      Public
      JavaScript
      •
      MIT License
      •0•2•0•0•Updated Feb 28, 2023Feb 28, 2023

    • paplot

      Public
      paplot creates various dynamic and interactive reports for cancer genome analysis.
      JavaScript
      •
      MIT License
      •6•25•1•0•Updated Feb 1, 2023Feb 1, 2023

    • GenomonFisher

      Public
      Genomon fisher exact test mutation caller
      Python
      •
      GNU General Public License v3.0
      •4•1•1•0•Updated Jan 6, 2023Jan 6, 2023

    • fusionfusion

      Public
      script for detecting fusion genes from several transcript alignment tools
      Python
      •
      GNU General Public License v3.0
      •8•9•2•1•Updated Aug 1, 2022Aug 1, 2022

    • GenomonPagesR

      Public
      Genomon web page
      SCSS
      •
      MIT License
      •0•0•0•0•Updated Mar 9, 2022Mar 9, 2022

    • genomon_pipeline_cloud

      Public
      Software for executing genomon pipeline in cloud environments
      Python
      •
      GNU General Public License v3.0
      •5•2•2•2•Updated Dec 9, 2021Dec 9, 2021

    • GenomonPresentation

      Public
      Repository for presentation slides and so on
      HTML
      •1•0•1•0•Updated Jul 6, 2020Jul 6, 2020

    • EBFilter

      Public
      empirical bayesian mutation filtering
      Python
      •
      GNU General Public License v3.0
      •5•1•4•0•Updated May 17, 2020May 17, 2020

    • GenomonContainer

      Public
      0•0•0•0•Updated Mar 30, 2020Mar 30, 2020

    • GenomonQC

      Public
      Genomon Quality Control
      Python
      •
      Other
      •3•0•0•0•Updated Feb 19, 2020Feb 19, 2020

    • GenomonExpression

      Public
      python script for calculating expression values from RNA-seq
      Python
      •
      GNU General Public License v3.0
      •6•4•1•0•Updated Sep 25, 2019Sep 25, 2019

    • azurebatchmon

      Public
      Wrapper program for Azure Batch simple job submission
      Python
      •0•0•0•0•Updated Apr 4, 2018Apr 4, 2018

    • GenomonVirusChecker

      Public
      software for checking the virus sequences in fastq files
      Python
      •4•2•1•0•Updated Oct 20, 2017Oct 20, 2017

    • genomon_database

      Public
      Downloadable data files for Genomon Project
      0•0•0•0•Updated Oct 16, 2017Oct 16, 2017

    • genomon_Rscripts

      Public
      R
      •
      Other
      •2•0•0•0•Updated Jun 15, 2017Jun 15, 2017

    • GenomonBreakPoint

      Public
      empirical bayesian framework for detecting somatic breakpoints from sequencing data
      Python
      •1•1•0•0•Updated Nov 20, 2016Nov 20, 2016

    • GenomonMutationAnnotator

      Public
      Python
      •
      GNU Lesser General Public License v3.0
      •2•0•0•0•Updated Dec 11, 2015Dec 11, 2015

    • GenomonHGC

      Public
      resouce for HGC supercomputer
      0•0•1•0•Updated Nov 12, 2015Nov 12, 2015