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* Update timm requirement from <=1.0.7,>=1.0.7 to >=1.0.7,<=1.0.9 (#2274)

* Update timm requirement from <=1.0.7,>=1.0.7 to >=1.0.7,<=1.0.9

Updates the requirements on [timm](https://github.com/huggingface/pytorch-image-models) to permit the latest version.
- [Release notes](https://github.com/huggingface/pytorch-image-models/releases)
- [Commits](huggingface/pytorch-image-models@v1.0.7...v1.0.9)

---
updated-dependencies:
- dependency-name: timm
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Update pyproject.toml

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Samet Akcay <[email protected]>

* 🐞Update `setuptools` requirement for PEP 660 support (#2320)

Update setup tools

Signed-off-by: Samet Akcay <[email protected]>

* Fix transforms for draem, dsr and rkde (#2324)

Signed-off-by: Blaz Rolih <[email protected]>

* Add check before loading metrics data from checkpoint (#2323)

Add check before loading from checkpoint

Signed-off-by: Blaz Rolih <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* Add PIMO (#2329)

* PIMO (#1726)

* update

Signed-off-by: jpcbertoldo <[email protected]>

* test binclf curves numpy and numba and fixes

Signed-off-by: jpcbertoldo <[email protected]>

* correct som docstrings

Signed-off-by: jpcbertoldo <[email protected]>

* torch interface and tests

Signed-off-by: jpcbertoldo <[email protected]>

* torch interface and tests

Signed-off-by: jpcbertoldo <[email protected]>

* constants regrouped in dataclass as class vars

Signed-off-by: jpcbertoldo <[email protected]>

* result class was unneccesary for per_image_binclf_curve

Signed-off-by: jpcbertoldo <[email protected]>

* factorize function _get_threshs_minmax_linspace

Signed-off-by: jpcbertoldo <[email protected]>

* small docs fixes

Signed-off-by: jpcbertoldo <[email protected]>

* add pimo numpy version and test

Signed-off-by: jpcbertoldo <[email protected]>

* move validation

Signed-off-by: jpcbertoldo <[email protected]>

* add `shared_fpr_metric` option

Signed-off-by: jpcbertoldo <[email protected]>

* add pimo torch functional version and test

Signed-off-by: jpcbertoldo <[email protected]>

* add torchmetrics interface and test

Signed-off-by: jpcbertoldo <[email protected]>

* renames and put things in init

Signed-off-by: jpcbertoldo <[email protected]>

* validate inputs in result objects

Signed-off-by: jpcbertoldo <[email protected]>

* result objects to from dict and tests

Signed-off-by: jpcbertoldo <[email protected]>

* add save and load methods to result objects and test

Signed-off-by: jpcbertoldo <[email protected]>

* refactor validations and minor changes

Signed-off-by: jpcbertoldo <[email protected]>

* test result objects' properties

Signed-off-by: jpcbertoldo <[email protected]>

* minor refactors

Signed-off-by: jpcbertoldo <[email protected]>

* add missing docstrings

Signed-off-by: jpcbertoldo <[email protected]>

* minore vocabulary fix for consistency

Signed-off-by: jpcbertoldo <[email protected]>

* add per image scores statistics and test it

Signed-off-by: jpcbertoldo <[email protected]>

* refactor constants notation

Signed-off-by: jpcbertoldo <[email protected]>

* add stats tests and test it

Signed-off-by: jpcbertoldo <[email protected]>

* change the meaning of AUPIMO.num_thresh

Signed-off-by: jpcbertoldo <[email protected]>

* interface to format pairwise test results

Signed-off-by: jpcbertoldo <[email protected]>

* improve doc

Signed-off-by: jpcbertoldo <[email protected]>

* add optional `paths` to result objects and some minor fixes and refactors

Signed-off-by: jpcbertoldo <[email protected]>

* remove frozen from dataclasses and some done todos

Signed-off-by: jpcbertoldo <[email protected]>

* review headers

Signed-off-by: jpcbertoldo <[email protected]>

* doc modifs

Signed-off-by: jpcbertoldo <[email protected]>

* refactor `score_less_than_thresh` in `_binclf_one_curve_python`

Signed-off-by: jpcbertoldo <[email protected]>

* correct license comments

Signed-off-by: jpcbertoldo <[email protected]>

* fix doc

Signed-off-by: jpcbertoldo <[email protected]>

* numba as extra requirement

Signed-off-by: jpcbertoldo <[email protected]>

* refactor copyrights from jpcbertoldo

Signed-off-by: jpcbertoldo <[email protected]>

* remove from __future__ import annotations

Signed-off-by: jpcbertoldo <[email protected]>

* refactor validations names

Signed-off-by: jpcbertoldo <[email protected]>

* dedupe file path validation

Signed-off-by: jpcbertoldo <[email protected]>

* fix tests

Signed-off-by: jpcbertoldo <[email protected]>

* Add todo

Signed-off-by: jpcbertoldo <[email protected]>

* refactor enums

Signed-off-by: jpcbertoldo <[email protected]>

* only logger.warning

Signed-off-by: jpcbertoldo <[email protected]>

* refactor test imports

Signed-off-by: jpcbertoldo <[email protected]>

* refactor docs

Signed-off-by: jpcbertoldo <[email protected]>

* refactor some docs

Signed-off-by: jpcbertoldo <[email protected]>

* correct pre commit errors

Signed-off-by: jpcbertoldo <[email protected]>

* remove author tag

Signed-off-by: jpcbertoldo <[email protected]>

* add thrid party program

Signed-off-by: jpcbertoldo <[email protected]>

* Update src/anomalib/metrics/per_image/pimo.py

* move HAS_NUMBA

Signed-off-by: jpcbertoldo <[email protected]>

* remove PIMOSharedFPRMetric

Signed-off-by: jpcbertoldo <[email protected]>

* make torchmetrics compute avg by dft

Signed-off-by: jpcbertoldo <[email protected]>

* pre-commit hooks corrections

Signed-off-by: jpcbertoldo <[email protected]>

* correct numpy.trapezoid

Signed-off-by: jpcbertoldo <[email protected]>

---------

Signed-off-by: jpcbertoldo <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* 🗑️ Remove numba (#2313)

* remove numba

Signed-off-by: Ashwin Vaidya <[email protected]>

* fix pre-commit checks

Signed-off-by: Ashwin Vaidya <[email protected]>

* add third-party-programs.txt

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* 🗑️ Remove unused methods (#2315)

* remove numba

Signed-off-by: Ashwin Vaidya <[email protected]>

* fix pre-commit checks

Signed-off-by: Ashwin Vaidya <[email protected]>

* remove all unused methods

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* PIMO: Port Numpy → Torch (#2316)

* remove numba

Signed-off-by: Ashwin Vaidya <[email protected]>

* fix pre-commit checks

Signed-off-by: Ashwin Vaidya <[email protected]>

* remove all unused methods

Signed-off-by: Ashwin Vaidya <[email protected]>

* replace numpy with torch

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* 🔨Refactor methods across files (#2321)

* remove numba

Signed-off-by: Ashwin Vaidya <[email protected]>

* fix pre-commit checks

Signed-off-by: Ashwin Vaidya <[email protected]>

* remove all unused methods

Signed-off-by: Ashwin Vaidya <[email protected]>

* replace numpy with torch

Signed-off-by: Ashwin Vaidya <[email protected]>

* refactor code

Signed-off-by: Ashwin Vaidya <[email protected]>

* refactor
move functional inside update
remove path from the metric

* Add changes from comments

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* Remove model to model comparison (#2325)

* rename to pimo

Signed-off-by: Ashwin Vaidya <[email protected]>

* minor refactor

Signed-off-by: Ashwin Vaidya <[email protected]>

* remove model to model comparison

Signed-off-by: Ashwin Vaidya <[email protected]>

* fix test

Signed-off-by: Ashwin Vaidya <[email protected]>

* PR comments

Signed-off-by: Ashwin Vaidya <[email protected]>

* Minor refactor

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* PR comments

Signed-off-by: Ashwin Vaidya <[email protected]>

* Remove unused enums

Signed-off-by: Ashwin Vaidya <[email protected]>

* update doc strings

Signed-off-by: Ashwin Vaidya <[email protected]>

* update param names

Signed-off-by: Ashwin Vaidya <[email protected]>

* add aupimo basic usage tutorial notebook (#2330)

* add aupimo basic usage tutorial notebook

Signed-off-by: jpcbertoldo <[email protected]>

* update scipy import

Signed-off-by: jpcbertoldo <[email protected]>

* add cite us

Signed-off-by: jpcbertoldo <[email protected]>

* minor

Signed-off-by: jpcbertoldo <[email protected]>

* modify texts and add illustration

Signed-off-by: jpcbertoldo <[email protected]>

* udpate working dir

Signed-off-by: jpcbertoldo <[email protected]>

---------

Signed-off-by: jpcbertoldo <[email protected]>

---------

Signed-off-by: jpcbertoldo <[email protected]>
Signed-off-by: Ashwin Vaidya <[email protected]>
Co-authored-by: Joao P C Bertoldo <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* Makes batch size dynamic (#2339)

Made batch dimension of ONNX export dynamic when specifying input shape.

* Add pimo tutorial advanced i (fixed) (#2336)

* uset all padim features to make it deterministic

Signed-off-by: jpcbertoldo <[email protected]>

* add aupimo notebook advanced i

Signed-off-by: jpcbertoldo <[email protected]>

* update readme

Signed-off-by: jpcbertoldo <[email protected]>

* modify changelog

Signed-off-by: jpcbertoldo <[email protected]>

* correct readme

Signed-off-by: jpcbertoldo <[email protected]>

* correct again

Signed-off-by: jpcbertoldo <[email protected]>

* minor corrections

Signed-off-by: jpcbertoldo <[email protected]>

---------

Signed-off-by: jpcbertoldo <[email protected]>

* Pimo tutorials/02 advanced ii (#2347)

* uset all padim features to make it deterministic

Signed-off-by: jpcbertoldo <[email protected]>

* add aupimo notebook advanced i

Signed-off-by: jpcbertoldo <[email protected]>

* update readme

Signed-off-by: jpcbertoldo <[email protected]>

* modify changelog

Signed-off-by: jpcbertoldo <[email protected]>

* correct readme

Signed-off-by: jpcbertoldo <[email protected]>

* correct again

Signed-off-by: jpcbertoldo <[email protected]>

* minor corrections

Signed-off-by: jpcbertoldo <[email protected]>

* add aupimo notebook advanced ii (pimo curve and integration bounds)

Signed-off-by: jpcbertoldo <[email protected]>

* fix links

Signed-off-by: jpcbertoldo <[email protected]>

* correct change log

Signed-off-by: jpcbertoldo <[email protected]>

---------

Signed-off-by: jpcbertoldo <[email protected]>

* Create epic.yaml

* 🔨 Update the issue templates (#2363)

* Update epic.yaml

* Update epic.yaml

* Update epic.yaml

* Update epic.yaml

* Update task.yaml

* Create user_story.yaml

* Update epic.yaml

* Pimo tutorials/03 advanced iii (#2348)

* add aupimo notebook advanced iii (aupimo score of a random model)

Signed-off-by: jpcbertoldo <[email protected]>

* add cite us

Signed-off-by: jpcbertoldo <[email protected]>

* update notebooks readme

Signed-off-by: jpcbertoldo <[email protected]>

---------

Signed-off-by: jpcbertoldo <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* 🔨 Deprecate try import and replace it with Lightning's package_available (#2373)

Replace try_import with lightnings package_available function

Signed-off-by: Samet Akcay <[email protected]>

* Refactor folder3d to avoid complex-structure (C901) issue (#2185)

* Refactored-make_folder3d_dataset-ruff-error-C901 (#1926)

Signed-off-by: sahusiddharth <[email protected]>

* Simplify folder 3d dataset (#2184)

---------

Signed-off-by: sahusiddharth <[email protected]>
Co-authored-by: Siddharth Sahu <[email protected]>

* 🚀 Add datumaro annotation dataloader (#2377)

* Add datumaro annotation dataloader

Signed-off-by: Ashwin Vaidya <[email protected]>

* Update changelog

Signed-off-by: Ashwin Vaidya <[email protected]>

* Add examples

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* Pimo tutorials/04 advanced iv  (#2352)

* add notebook 701e_aupimo_advanced_iv on load/save and statistical comparisons

Signed-off-by: jpcbertoldo <[email protected]>

* make `AUPIMOResult.num_thresholds` optional

Signed-off-by: jpcbertoldo <[email protected]>

* add aupimo notebook advanced iv (load/save and statistical tests)

Signed-off-by: jpcbertoldo <[email protected]>

* simplify cite us and mention intal

Signed-off-by: jpcbertoldo <[email protected]>

* fix readme

Signed-off-by: jpcbertoldo <[email protected]>

---------

Signed-off-by: jpcbertoldo <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* 🐞 Defer OpenVINO import to avoid unnecessary warnings (#2385)

* Fix openvino import issue

Signed-off-by: Samet Akcay <[email protected]>

* Fix pre-commit issues

Signed-off-by: Samet Akcay <[email protected]>

---------

Signed-off-by: Samet Akcay <[email protected]>

* 🚀 Add VLM based Anomaly Model (#2344)

* [Draft] Llm on (#2165)

* Add TaskType Explanation

Signed-off-by: Bepitic <[email protected]>

* Add llm model

Signed-off-by: Bepitic <[email protected]>

* add ollama

Signed-off-by: Bepitic <[email protected]>

* better description for descr in title

Signed-off-by: Bepitic <[email protected]>

* add text of llm into imageResult visualization

* add text of llm into imageResult visualization

Signed-off-by: Bepitic <[email protected]>

* latest changes

Signed-off-by: Bepitic <[email protected]>

* add wip llava/llava_next

Signed-off-by: Bepitic <[email protected]>

* add init

Signed-off-by: Bepitic <[email protected]>

* add text of llm into imageResult visualization

Signed-off-by: Bepitic <[email protected]>

* latest changes

Signed-off-by: Bepitic <[email protected]>

* upd Lint

Signed-off-by: Bepitic <[email protected]>

* fix visualization with description

Signed-off-by: Bepitic <[email protected]>

* show the images every batch

Signed-off-by: Bepitic <[email protected]>

* fix docstring and error management

Signed-off-by: Bepitic <[email protected]>

* Add compatibility for TaskType.EXPLANATION.

Signed-off-by: Bepitic <[email protected]>

* Remove, show in the engine-Visualization.

* fix visualization and llm openai multishot.

* fix Circular import problem

* Add HugginFace To LLavaNext

Signed-off-by: Bepitic <[email protected]>

---------

Signed-off-by: Bepitic <[email protected]>

* 🔨 Scaffold for refactor (#2340)

* initial scafold

Signed-off-by: Ashwin Vaidya <[email protected]>

* Apply PR comments

Signed-off-by: Ashwin Vaidya <[email protected]>

* rename dir

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* Add ChatGPT (#2341)

* initial scafold

Signed-off-by: Ashwin Vaidya <[email protected]>

* Apply PR comments

Signed-off-by: Ashwin Vaidya <[email protected]>

* rename dir

Signed-off-by: Ashwin Vaidya <[email protected]>

* delete llm_ollama

Signed-off-by: Ashwin Vaidya <[email protected]>

* Add ChatGPT

Signed-off-by: Ashwin Vaidya <[email protected]>

* Add ChatGPT

Signed-off-by: Ashwin Vaidya <[email protected]>

* Remove LLM model

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* Add Huggingface (#2343)

* initial scafold

Signed-off-by: Ashwin Vaidya <[email protected]>

* Apply PR comments

Signed-off-by: Ashwin Vaidya <[email protected]>

* rename dir

Signed-off-by: Ashwin Vaidya <[email protected]>

* delete llm_ollama

Signed-off-by: Ashwin Vaidya <[email protected]>

* Add ChatGPT

Signed-off-by: Ashwin Vaidya <[email protected]>

* Add ChatGPT

Signed-off-by: Ashwin Vaidya <[email protected]>

* Remove LLM model

Signed-off-by: Ashwin Vaidya <[email protected]>

* Add transformers

Signed-off-by: Ashwin Vaidya <[email protected]>

* Remove llava

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* 🔨 Minor Refactor (#2345)

Refactor

Signed-off-by: Ashwin Vaidya <[email protected]>

* undo changes

Signed-off-by: Ashwin Vaidya <[email protected]>

* undo changes

Signed-off-by: Ashwin Vaidya <[email protected]>

* undo changes to image.py

Signed-off-by: Ashwin Vaidya <[email protected]>

* Add explanation visualizer (#2351)

* Add explanation visualizer

Signed-off-by: Ashwin Vaidya <[email protected]>

* bug-fix

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* 🔨 Allow setting API keys from env (#2353)

Allow setting API keys from env

Signed-off-by: Ashwin Vaidya <[email protected]>

* 🧪 Add tests (#2355)

* Add tests

Signed-off-by: Ashwin Vaidya <[email protected]>

* remove explanation task type

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Ashwin Vaidya <[email protected]>

* minor fixes

Signed-off-by: Ashwin Vaidya <[email protected]>

* Update changelog

Signed-off-by: Ashwin Vaidya <[email protected]>

* Fix tests

Signed-off-by: Ashwin Vaidya <[email protected]>

* Address PR comments

Signed-off-by: Ashwin Vaidya <[email protected]>

* update name

Signed-off-by: Ashwin Vaidya <[email protected]>

* Update src/anomalib/models/image/vlm_ad/lightning_model.py

Co-authored-by: Samet Akcay <[email protected]>

* update name

Signed-off-by: Ashwin Vaidya <[email protected]>

---------

Signed-off-by: Bepitic <[email protected]>
Signed-off-by: Ashwin Vaidya <[email protected]>
Co-authored-by: Paco <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* Add ensembling methods for tiling to Anomalib (#1226)

* Fixed broken links in readme

* Fixed inference command in readme

* Add tiling for ensemble

* Add tests for tiling for ensemble

* Moved ensemble tiler to separate file

* Modify padim config for ensemble

* Add tiling to dataset

* Revert changes to train

* Add tiling to collate fn

* Fix tiling in collate

* Change val. function to protected

* Add tile number logic

* Move collate fn to separate file

* Update tests for tiler

* Add training loop for ensemble

* Add model input size setup

* Move ens config to separate file

* Revert mvtec modifications

* Remove unused imports in mvtec

* Add batch adjustment to untiling

* Add predict step to ensemble

* Add comment and docstring to tile joining function

* Move tile joining to separate function

* Add joining for all tiled data

* Add joining for all box data

* Refactor pred. joining as modular class

* Fix box joining

* Add label and score joining

* Add ensemble visualization

* Add end of predict hook

* Add metric computation

* Fix metric thresholds

* Add removal of individual visualization

* Add demo1 notebook

* Add docstrings and cleanup

* Add memory benchmark

* Add modular class for storing predictions

* Add metric to separate class

* Refactor to support prediction data class

* Rename predictions class

* Add filesystem predictions class

* Add resized predictions class

* Fix joiner for classification task

* Add page peak to memory benchmark

* Add global stats calculation

* Add docstrings to stats calculation

* Refactor joiner for pipeline

* Refactor stats into pipeline

* Refactor metrics as pipeline block

* Refactor visualization as pipeline block

* Refactor postprocessing into a pipeline

* Add normalization and thresholding on joined predictions

* Refactor tiler to accept config file

* Add smoothing of tile joins.

* Refactor ensemble datamodule preparation

* Remove unused changes in dataloader

* Fix metric configuration

* Fix box coordinates in joining

* Add ensemble callbacks preparation function

* Fix box prediction bug in postprocess

* Add ensemble params to config

* Refactor postprocessing.

* Refactor post-processing

* Refactor predictions

* Code cleanup

* Optimize prediction storage

* Make join smoothing configurable

* Cleanup before PR

* Fix stats pipeline

* Fix logging strings

* Fix memory benchmark

* Fix tiler issues

* Fix import issues

* Fix naming in metrics and visualization

* Fix cyclic import

* Make logging lazy

* Refactor tiler tests

* Added collate tiling tests

* Added ensemble helper functions tests

* Refactor for dummy ensemble config

* Refactor for dummy base config

* Add tests for prediction storage

* Add tests for prediction joiner

* Add tests for visualization

* Fix small issues in tests

* Add metrics test

* Add post-processing tests

* Fix tiler to work with different instance

* Move seed setting inside train loop

* Fix pipeline stats bug

* Rename ensemble config fixture

* Add pipeline tests

* Fix config in pipeline tests

* Add training script test

* Fix types and docstrings

* Move and rename to tiled_ensemble

* Fix bug in label joining.

* Remove memory benchmark

* Cleanup files

* Fix metrics setup

* Rename collate function

* Add license to test files

* Rename fixtures

* Add more comments to tiled ensemble training

* Add start of training log message

* Refactor tiler to have explicit arguments

* Refactor pred. storage to have explicit arguments

* Refactor metrics to have explicit arguments

* Refactor visualization to have explicit arguments

* Refactor post-processing to have explicit arguments

* Sort imports

* Add test ensemble script

* Fix join smoothing bug

* Add more documentation to doc-strings

* Remove unused import

* Add brief tiled ensemble documentation

* Update typehints

* Make training args more clear

* Revert addition of no threshold option.

* Refactor normalization and threshold config

* Remove tiled ensemble from docs index

* Add comments to clarify parts of ensemble config

* Improve ensemble config comments

* Add num_tiles attribute to tiler.

* Fix metrics process docstring

* Fix visualization bug and cover with test

* Replace strings with enum

* Improve comments in joiner.

* Fix bug when model doesn't have anomaly maps.

* Improve docstrings (types, clarify).

* Fix visualization tests

* Fix dict membership checks

* Add saving of ensemble config file

* Update test script args

* Cover test script with tests

* Update export warning

* Fix case when no test or val data

* Improve documentation images

* Add images for documentation

* Add codacy suggestion

* Refactor joiner to single class

* Refactor storage names and config

* Update normalization and threshold stage names

* Add transforms independent input size to models

Signed-off-by: blaz-r <[email protected]>

* Make collate function a datamodule attribute

Signed-off-by: blaz-r <[email protected]>

* Refactor tiled ensemble train into pipeline step

Signed-off-by: blaz-r <[email protected]>

* Refactor tiled ensemble prediction into pipeline step

Signed-off-by: blaz-r <[email protected]>

* Refactor tiled ensemble merging into pipeline step

Signed-off-by: blaz-r <[email protected]>

* Refactor tiled ensemble seam smoothing into pipeline step

Signed-off-by: blaz-r <[email protected]>

* Refactor tiled stats calculation into pipeline step

Signed-off-by: blaz-r <[email protected]>

* Fix ckpt loading when predicting on test set.

Signed-off-by: blaz-r <[email protected]>

* Add logging and add tqdm to pipeline steps.

Signed-off-by: blaz-r <[email protected]>

* Refactor normalization pipeline step

Signed-off-by: blaz-r <[email protected]>

* Refactor thresholding into new pipeline job

* Fix transforms issue when predicting with dataloader

* Add visualization as new pipeline step

* Add metrics as new pipeline step

* Format the code and address some lint problems

Signed-off-by: Blaz Rolih <[email protected]>

* Add code to skip test if test split is none

Signed-off-by: Blaz Rolih <[email protected]>

* Add accelerator to metrics and smoothing

Signed-off-by: Blaz Rolih <[email protected]>

* Make threshold acq helper function and add to threshold to metrics

Signed-off-by: Blaz Rolih <[email protected]>

* Make a separate test pipeline

Signed-off-by: Blaz Rolih <[email protected]>

* Restructure tiled ensemble files into directories

Signed-off-by: Blaz Rolih <[email protected]>

* Pipeline code cleanup

Signed-off-by: Blaz Rolih <[email protected]>

* Remove old tiled ensemble files

Signed-off-by: blaz-r <[email protected]>

* Remove old post processing files

Signed-off-by: blaz-r <[email protected]>

* Fix sigma value read in smoothing

Signed-off-by: blaz-r <[email protected]>

* Update stats calc and normalization

Signed-off-by: blaz-r <[email protected]>

* Update args naming convention

Signed-off-by: blaz-r <[email protected]>

* Refactor code for nice config

Signed-off-by: blaz-r <[email protected]>

* Update docs structure for new system

Signed-off-by: blaz-r <[email protected]>

* Cleanup train code

Signed-off-by: blaz-r <[email protected]>

* Fix test script args

Signed-off-by: blaz-r <[email protected]>

* Update box merging

Signed-off-by: blaz-r <[email protected]>

* Refactor helper function tests

Signed-off-by: blaz-r <[email protected]>

* Small changes in helper and engine

Signed-off-by: blaz-r <[email protected]>

* Refactor merging tests

Signed-off-by: blaz-r <[email protected]>

* Refactor tiling tests

Signed-off-by: blaz-r <[email protected]>

* Refactor metrics test

Signed-off-by: blaz-r <[email protected]>

* Add support for different threshold methods

Signed-off-by: blaz-r <[email protected]>

* Format tests

Signed-off-by: blaz-r <[email protected]>

* Change test to predict

Signed-off-by: blaz-r <[email protected]>

* Refactor stats calculation tests

Signed-off-by: blaz-r <[email protected]>

* Refactor prediction data tests

Signed-off-by: blaz-r <[email protected]>

* Update metrics tests

Signed-off-by: blaz-r <[email protected]>

* Move metrics tests to components

Signed-off-by: blaz-r <[email protected]>

* Refactor seam smoothing tests

Signed-off-by: blaz-r <[email protected]>

* Refactor normalization tests

Signed-off-by: blaz-r <[email protected]>

* Move mock stats to conftest

Signed-off-by: blaz-r <[email protected]>

* Fix typehints for generator

Signed-off-by: blaz-r <[email protected]>

* Refactor threshold tests

Signed-off-by: blaz-r <[email protected]>

* Temporarily disable box minmax

Signed-off-by: blaz-r <[email protected]>

* Add tiled ensemble integration test

Signed-off-by: blaz-r <[email protected]>

* Fix normalization tests and add additional merging test

Signed-off-by: blaz-r <[email protected]>

* Add tile collater tests

Signed-off-by: blaz-r <[email protected]>

* Change dataset in tests to dummy

Signed-off-by: blaz-r <[email protected]>

* Format and fix linter errors

Signed-off-by: blaz-r <[email protected]>

* Format and some cleanup

Signed-off-by: blaz-r <[email protected]>

* Rename predict to eval

Signed-off-by: blaz-r <[email protected]>

* Update docs for refactored version of code

Signed-off-by: blaz-r <[email protected]>

* Cleanup the docs

Signed-off-by: blaz-r <[email protected]>

* Update ensemble engine

Signed-off-by: blaz-r <[email protected]>

* Remove boxes from pipelines and tests

Signed-off-by: blaz-r <[email protected]>

* Fix TODO comment issue

Signed-off-by: blaz-r <[email protected]>

* Fix unused model in ens. engine

Signed-off-by: blaz-r <[email protected]>

* Fix path case in test

Signed-off-by: blaz-r <[email protected]>

* Change temporary dir to project_path

Signed-off-by: blaz-r <[email protected]>

* Change mvtec to MVTec in test path

Signed-off-by: Blaz Rolih <[email protected]>

---------

Signed-off-by: blaz-r <[email protected]>
Signed-off-by: Blaz Rolih <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* 📚 Add training from a checkpoint example (#2389)

* Add training from a checkpoint example

Signed-off-by: Samet Akcay <[email protected]>

* Replace patchcore example with efficient-ad

Signed-off-by: Samet Akcay <[email protected]>

---------

Signed-off-by: Samet Akcay <[email protected]>

* Export experiment duration in seconds in CSV. (#2392)

* Export experiment duration in seconds in CSV.

Signed-off-by: Weilin Xu <[email protected]>

* Update CHANGELOG

Signed-off-by: Weilin Xu <[email protected]>

* Log fit and test durations separately.

Signed-off-by: Weilin Xu <[email protected]>

---------

Signed-off-by: Weilin Xu <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* Make single GPU benchmarking 5x more efficient (#2390)

* Use SerialRunner if only one CUDA device is available.

Signed-off-by: Weilin Xu <[email protected]>

* Resolve PLR6201.

Signed-off-by: Weilin Xu <[email protected]>

* Update CHANGELOG.

Signed-off-by: Weilin Xu <[email protected]>

* Keep the same logging level in benchmarking.

Signed-off-by: Weilin Xu <[email protected]>

---------

Signed-off-by: Weilin Xu <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* 🐞 Fix installation package issues (#2395)

* Update the coverage settings

Signed-off-by: Samet Akcay <[email protected]>

* Remove VlmAd's relative import

Signed-off-by: Samet Akcay <[email protected]>

* Revert relative imports

Signed-off-by: Samet Akcay <[email protected]>

* Add type checking

Signed-off-by: Samet Akcay <[email protected]>

---------

Signed-off-by: Samet Akcay <[email protected]>

* Export the flattened config in benchmark CSV. (#2391)

* Export the flattened config in benchmark CSV.

Signed-off-by: Weilin Xu <[email protected]>

* Update CHANGELOG

Signed-off-by: Weilin Xu <[email protected]>

* Reuse the existing flatten_dict().

Signed-off-by: Weilin Xu <[email protected]>

---------

Signed-off-by: Weilin Xu <[email protected]>
Co-authored-by: Samet Akcay <[email protected]>

* `v1.2.0` Release (#2397)

Prepare v1.2.0 release (#2396)

* Update changelog



* Update the version in __init__



---------

Signed-off-by: Samet Akcay <[email protected]>

* Bump Anomalib version to `2.0.0dev` in `main` (#2402)

Update __init__.py

* 🐞Replace package_available with module_available (#2407)

* ignore tiled ensemble for now

Signed-off-by: Samet Akcay <[email protected]>

* ollama version

Signed-off-by: Samet Akcay <[email protected]>

* Exclude tiled ensemble unit tests

Signed-off-by: Samet Akcay <[email protected]>

---------

Signed-off-by: dependabot[bot] <[email protected]>
Signed-off-by: Samet Akcay <[email protected]>
Signed-off-by: Blaz Rolih <[email protected]>
Signed-off-by: jpcbertoldo <[email protected]>
Signed-off-by: Ashwin Vaidya <[email protected]>
Signed-off-by: sahusiddharth <[email protected]>
Signed-off-by: Bepitic <[email protected]>
Signed-off-by: blaz-r <[email protected]>
Signed-off-by: Weilin Xu <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Blaž Rolih <[email protected]>
Co-authored-by: Ashwin Vaidya <[email protected]>
Co-authored-by: Joao P C Bertoldo <[email protected]>
Co-authored-by: Marcus Pertlwieser <[email protected]>
Co-authored-by: Siddharth Sahu <[email protected]>
Co-authored-by: Paco <[email protected]>
Co-authored-by: Weilin Xu <[email protected]>
Co-authored-by: Harim Kang <[email protected]>
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7 changes: 0 additions & 7 deletions docs/source/markdown/guides/how_to/pipelines/index.md
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Expand Up @@ -6,13 +6,6 @@ This section contains tutorials on how to use different pipelines of Anomalib an
:margin: 1 1 0 0
:gutter: 1

:::{grid-item-card} {octicon}`stack` Tiled Ensemble
:link: ./tiled_ensemble
:link-type: doc

Learn more about how to use the tiled ensemble pipelines.
:::

:::{grid-item-card} {octicon}`gear` Custom Pipeline
:link: ./custom_pipeline
:link-type: doc
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157 changes: 0 additions & 157 deletions docs/source/markdown/guides/how_to/pipelines/tiled_ensemble.md

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322 changes: 273 additions & 49 deletions notebooks/700_metrics/701b_aupimo_advanced_i.ipynb

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152 changes: 134 additions & 18 deletions notebooks/700_metrics/701c_aupimo_advanced_ii.ipynb

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2 changes: 1 addition & 1 deletion src/anomalib/models/components/base/export_mixin.py
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Expand Up @@ -125,7 +125,7 @@ def to_onnx(
dynamic_axes = (
{"input": {0: "batch_size"}, "output": {0: "batch_size"}}
if input_size
else {"input": {0: "batch_size", 2: "height", 3: "width"}, "output": {0: "batch_size"}}
else {"input": {0: "batch_size", 2: "height", 3: "weight"}, "output": {0: "batch_size"}}
)
onnx_path = export_root / "model.onnx"
# apply pass through the model to get the output names
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43 changes: 0 additions & 43 deletions tools/tiled_ensemble/ens_config.yaml

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28 changes: 0 additions & 28 deletions tools/tiled_ensemble/eval.py

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17 changes: 0 additions & 17 deletions tools/tiled_ensemble/train.py

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