[PRE REVIEW]: SkyPy: A package for modelling the Universe

[whedon]

Submitting author: @rrjbca (Richard Rollins)
Repository: https://github.com/skypyproject/skypy
Version: v0.4
Editor: @arfon
Reviewers: @cescalara, @rmorgan10
Managing EiC: Kevin M. Moerman

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

Author instructions

Thanks for submitting your paper to JOSS @rrjbca. Currently, there isn't an JOSS editor assigned to your paper.

@rrjbca if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). In addition, this list of people have already agreed to review for JOSS and may be suitable for this submission (please start at the bottom of the list).

Editor instructions

The JOSS submission bot @whedon is here to help you find and assign reviewers and start the main review. To find out what @whedon can do for you type:

@whedon commands

[whedon]

Hello human, I'm @whedon, a robot that can help you with some common editorial tasks.

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

For a list of things I can do to help you, just type:

@whedon commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@whedon generate pdf

[whedon]

Software report (experimental):

github.com/AlDanial/cloc v 1.88  T=0.22 s (414.9 files/s, 32567.2 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
Python                          46           1029           1740           1999
reStructuredText                17            333            225            469
SVG                              1              0              0            333
YAML                            16              9              0            238
DOS Batch                        1             21              1            150
Markdown                         5             55              0            148
JSON                             1              0              0            121
make                             1             22              5            108
INI                              1             16              0             99
CSS                              1              3              0             12
TOML                             1              2              0              5
-------------------------------------------------------------------------------
SUM:                            91           1490           1971           3682
-------------------------------------------------------------------------------


Statistical information for the repository 'b711181b2c9c25c809bcd996' was
gathered on 2021/02/17.
The following historical commit information, by author, was found:

Author                     Commits    Insertions      Deletions    % of changes
Adam Amara                       2          1497              0            6.49
Andrew R. Williamson             1             4              0            0.02
Andy Lundgren                    1            55              5            0.26
Brian Nord                       1             4              0            0.02
Ian Harrison                     8           710             84            3.44
Ian Harry                        4           246            126            1.61
JonathanDHarris                  2            72              1            0.32
Juan Pablo Cordero               3           364             19            1.66
Lucia F. de la Bella             1           126              0            0.55
Lucia-Fonseca                   15          1667            242            8.28
Nicolas Tessore                 70          4915           4762           41.96
Richard R                       43          3126            929           17.58
Sarah Bridle                     2            13             11            0.10
Simon Birrer                     1             0              1            0.00
nstarman                         1             3              0            0.01
philipp128                       9          1111            148            5.46
skypybot                         7             2           2819           12.23

Below are the number of rows from each author that have survived and are still
intact in the current revision:

Author                     Rows      Stability          Age       % in comments
Adam Amara                  277           18.5          0.0               44.40
Andy Lundgren                32           58.2         10.1               18.75
Ian Harrison                241           33.9          0.9               11.20
JonathanDHarris               3            4.2          3.0                0.00
Lucia-Fonseca               465           27.9          7.9               19.78
Nicolas Tessore            2191           44.6          4.7               11.82
Richard R                  1237           39.6          2.7               17.70
Sarah Bridle                 11           84.6          0.9               18.18
nstarman                      3          100.0          3.8               33.33
philipp128                  307           27.6          8.5                6.84
skypybot                      1           50.0          1.2                0.00

[whedon]

PDF failed to compile for issue #3043 with the following error:

Can't find any papers to compile :-(

[Kevin-Mattheus-Moerman]

@whedon generate pdf from branch joss-paper

[whedon]

Attempting PDF compilation from custom branch joss-paper. Reticulating splines etc...

[whedon]

PDF failed to compile for issue #3043 with the following error:

Error producing PDF.
! Use of \author doesn't match its definition.
\new@ifnextchar ...served@d = #1\def \reserved@a {
#2}\def \reserved@b {#3}\f...
l.292 ....uk}{\nolinkurl{[email protected]}}}}

Looks like we failed to compile the PDF

[Kevin-Mattheus-Moerman]

@openjournals/dev can you help trouble shoot this error ☝️

[Kevin-Mattheus-Moerman]

@dpsanders @dfm could one of you edit this submission? I know you are both handling quite a few submissions already so let me know if you cannot. Alternatively @terrytangyuan since this relates to machine learning do you think you can help?

[arfon]

@openjournals/dev can you help trouble shoot this error ☝️

I think the @ in the emails in the authors need escaping, e.g.:

authors:
  - name: Adam Amara^[adam.amara\@port.ac.uk]
    orcid: 0000-0003-3481-3491
    affiliation: 1

[Kevin-Mattheus-Moerman]

@rrjbca can you implement these changes and call @whedon generate pdf from branch joss-paper here to update the paper?

[rrjbca]

@whedon generate pdf from branch joss-paper

[whedon]

Attempting PDF compilation from custom branch joss-paper. Reticulating splines etc...

[whedon]

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

[terrytangyuan]

@dpsanders @dfm could one of you edit this submission? I know you are both handling quite a few submissions already so let me know if you cannot. Alternatively @terrytangyuan since this relates to machine learning do you think you can help?

Sorry I probably don't have bandwidth to help at this point.

[Kevin-Mattheus-Moerman]

@dpsanders @dfm could one of you edit this submission? I think you have a lot on your plates already so no worries if you can't. Thanks!

[arfon]

If @dpsanders or @dfm can't take it I can.

[dpsanders]

I don't think I can take any more on right now, thanks.

[arfon]

@whedon assign me as editor

[whedon]

OK, the editor is @arfon

[arfon]

@rrjbca - thanks for your submission to JOSS? Could you take a look a this list of potential reviewers and identify a few people who would be good candidates to review this submission? (Please avoid @mentioning them here).

Also, if there are other people in the community who you think might be able to give this package a good review, please let me know.

[rrjbca]

@arfon thank you for considering our submission! We would suggest the following reviewers: cescalara, rmorgan10, jborrow, ejhigson, astrom-tom, coljac, aureliocarnero, adrn, steven-murray, mgckind.

[arfon]

👋 @cescalara @rmorgan10 @adrn - would any of you be willing to review this submission for JOSS? We carry out our checklist-driven reviews here in GitHub issues and follow these guidelines: https://joss.readthedocs.io/en/latest/reviewer_guidelines.html

The submission under consideration is SkyPy: A package for modelling the Universe

[cescalara]

Hi, I'd be happy to review.

[arfon]

@rrjbca - does this submission accompany a paper in a AAS journal?

[arfon]

@whedon add @cescalara as reviewer

[whedon]

OK, @cescalara is now a reviewer

[arfon]

Hi, I'd be happy to review.

⚡ thanks! I'll wait until a second reviewer has been identified before opening the main review issue. Hopefully this won't take too long 😄

[rmorgan10]

I'd be happy to review as well. I'm currently away from my computer so I won't be able to start my review until next week, but I'll certianly be able to get it done within the usual JOSS timeframe

[rrjbca]

@rrjbca - does this submission accompany a paper in a AAS journal?

@arfon No this is a stand-alone submission

[arfon]

@whedon add @rmorgan10 as reviewer

[whedon]

OK, @rmorgan10 is now a reviewer

[arfon]

@whedon start review

[whedon]

OK, I've started the review over in #3056.

[arfon]

@cescalara, @rmorgan10 - thanks for agreeing to review this submission. See you over in #3056 where the main review will take place.