fix to adv-diff-2d examples as mentioned in issue #453 (#456)

Co-authored-by: Kojec1 <[email protected]>
Co-authored-by: Sylwester Arabas <[email protected]>

.github/workflows/tests+pypi.yml

@@ -232,18 +232,25 @@ jobs:
           NUMBA_OPT: 1
         run: python -m pytest --durations=10 -p no:unraisableexception -We tests/devops_tests/test_notebooks.py
 
-      - if: ${{ github.ref == 'refs/heads/main' && matrix.platform == 'ubuntu-latest' && matrix.python-version == '3.11'}}
+      - if: ${{ matrix.platform == 'ubuntu-latest' && matrix.python-version == '3.11'}}
         run: |
           mkdir -p /home/runner/work/_temp/_github_home/figures
+          rm /tmp/pytest-of-runner/pytest-current/test_run_notebooks_examples_Pycurrent
           mv /tmp/pytest-of-runner/pytest-current/test_run_notebooks_examples_*/fig_4.svg /home/runner/work/_temp/_github_home/figures
           mv /tmp/pytest-of-runner/pytest-current/test_run_notebooks_examples_*/advection_diffusion.gif /home/runner/work/_temp/_github_home/figures
-        
+
+      # - if: ${{ failure() }}
+      #   uses: mxschmitt/action-tmate@v3
+      #   with:
+      #     limit-access-to-actor: true
+
       - if: ${{ github.ref == 'refs/heads/main' && matrix.platform == 'ubuntu-latest' && matrix.python-version == '3.11'}}
         uses: eine/tip@master
         with:
           token: ${{ secrets.GITHUB_TOKEN }}
           files: |
             /github/home/figures/*.svg
+            /github/home/figures/*.gif
 
   devops:
     runs-on: ubuntu-latest

examples/README.md

@@ -40,7 +40,10 @@ Each of the examples listed below can either be executed using Jupyer after down
   [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyMPDATA/blob/main/examples/PyMPDATA_examples/Molenkamp_test_as_in_Jaruga_et_al_2015_Fig_12/demo.ipynb)
 - 1D advection-diffusion example with animation    
   [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyMPDATA.git/main?urlpath=lab/tree/examples/PyMPDATA_examples%2Fadvection_diffusion_1d/demo.ipynb) 
-  [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyMPDATA/blob/main/examples/PyMPDATA_examples/advection_diffusion_1d/demo.ipynb)    
+  [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyMPDATA/blob/main/examples/PyMPDATA_examples/advection_diffusion_1d/demo.ipynb)
+- 2D advection-diffusion example with visualization    
+  [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyMPDATA.git/main?urlpath=lab/tree/examples/PyMPDATA_examples%2Fadvection_diffusion_2d/advection-diffusion-2d.ipynb)
+  [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyMPDATA/blob/main/examples/PyMPDATA_examples/advection_diffusion_2d/advection-diffusion-2d.ipynb)
 - 2D shallow-water equations (3D elliptic drop spreading on 2D plane under gravity example from [Jarecka et al. 2015](https://doi.org/10.1016/j.jcp.2015.02.003))   
   - Fig 6: [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyMPDATA.git/main?urlpath=lab/tree/examples/PyMPDATA_examples/Jarecka_et_al_2015/fig_6.ipynb)
   [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyMPDATA/blob/main/examples/PyMPDATA_examples/Jarecka_et_al_2015/fig_6.ipynb)

setup.py

@@ -77,6 +77,7 @@ def get_long_description():
             "pytest",
             "pytest-benchmark",
             "joblib" + ("==1.4.0" if CI else ""),
+            "imageio",
         ]
     },
     author="https://github.com/open-atmos/PyMPDATA/graphs/contributors",