Fix: Auto fill ontology viw of input when we click the '+' button in summary page #512
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syphax-bouazzouni
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Feb 22, 2024
syphax-bouazzouni
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Mar 25, 2024
…summary page (#512) * auto fill ontology viw of input when coming form summary page * fix view of input in upload ontology and edit submission
syphax-bouazzouni
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Apr 3, 2024
…w Ontologies selector & New Annotator UI page (#488) * Fix: Search page issues (#483) * fix search page typos * add icons for reuses and more from ontology buttons in search page * display each definition in a new line for serch results * Feauture: internationalization part 2 - FAIRScore details, Ontology viewer, browse, metadata curator bulk edit pages (#473) * internationalization fairescore details page * internationalization of ontology_views page * internationalization of edit ontology page * internationalization of browse page * Feature : internationalization part 3- Feedback, Visits, Concepts list and jump_to and annotator plus (#474) * internationalization of annotatorplus/index page * internationalization of notifier/feedback page * internationalization of concepts_browsers/concept_list page * internationalization of ontologies/visits page * internationalization of additional_metadata page * internationalization of concepts_browsers/jump_to page * Feature: internationalization part 4 - Submit success page and Ontology metrics, relations, submissions sections (#475) * internationalization of submit_success ontology * internationalization of ontology_submissions_section page * internationalization of ontology_relations_network page * internationalization of ontology_metrcis_section page * internationalization of scheme page * Feature: internationalization part 5 - FAIRScore, Concept tree and details , widgets, ontology description pages (#476) * internationalization ontologies/fair_score file * internationalization of submission_location_form file * internationalization of concept_tree file * internationalization of ontology_fairness_section file * internationalization of visualize file * internationalization of widgets file * Feature: internationalization part 6 - Metrics, Summary, Scheme and Virtual appliance page (#477) * internationalization of sections/metadata file * internationalization of sections/metrics file * internationalization of schemes/scheme file * internationalization of ontology_fairness_section file * internationalization of virtual_appliance/index file * Feature: internationalization part 7 - Projects page (#478) * internationalization of form projects file * internationalization of edit projects file * internationalization of new projects file * internationalization of show projects file * internationalization of admin/licenses/notice file * Feature: internationalization part 8 - groups page (#479) * internationalization of form file * internationalization of group file * internationalization of edit file * internationalization of index file * internationalization of new file * Feature: internationalization part 9 - Categories page (#481) * internationalization of form file * internationalization of group file * internationalization of edit file * internationalization of index file * internationalization of new file * internationalization of form file * internationalization of edit file * internationalization of index file * internationalization of new file * internationalization of category file * Feature: internationalization part 10 - login and statistics pages (#482) * internationalization of lost_password file * internationalization of lost_password_success file * internationalization of statistics/index file * Feature: internationalization part 11 - users page (#484) * internationalization of edit file * internationalization of show file * internationalization of index file * Feature: internationalization part 12 - notes page (#487) * internationalization of new_comment page * internationalization of note_proposal page * internationalization of note_line page * internationalization of thread page * internationalization of notes/replay pages * Feature : internationalization part 1 - Feedback, Metadata curator, Ontology new, Feedback and Home pages (#472) * internationalization of feedback pages * internationalization of home page * internationalization of new ontology page * internationalization of matadata tab file * delete insert_sample_text and add see_details * Feature : internationalization part 13 - mappings page (#489) * internationalization of count file * internationalization of form file * internationalization of show file * internationalization of loader file * internationalization of loaded_mappings file * internationalization of mapping type selector file * internationalization of show line file * internationalization of mapping table file * Feature : internationalization part 14 - agents page (#490) * internationalization of agent file * internationalization of form file * internationalization of index file * internationalization of agent_usage file * Feature: Update annotator page design (#467) * make radio chip component * udpate the design of recommender page inputs * make radio chip selected initially * make number component and add it to lookbook * add recommender page advanced options * add advanced options revreal to recommender page * handle recommender keywords input text area in recommender page * add results table in recommender page * add sort parameter to option component * make progress bar component * fix recommender page results section style * display recommender page results * add default sorting column in table component * heighlight the row with max final score in recommender page * highlight selected annotations in text recommendation area in recommender page * make edit work in recommender page * make filters work in recommender page * do logic of ontologies and ontologies sets on recommener page * define constraints for the inputs (mins and maxes) in recommender page * limit recommender input text size by 500 char * make insert sample text work in recommender page * add cite button in recommender page * remove get annotations button in recommender page * add recommender cite url * use stimulus values in table component * clean recommender page controllers code * add recommender page texts to local lang files * make advancced options open by default when it's not empty in recommender page * clean recommender page controllers code * init annotator page new design * display annotator page results * add match type in annotator page * add context to annotator results table * add results count in annotator page * Add annotator advanced options * display parents in annotator results * add score to annotator results * group contexts by concept in annotator results * remove unnecessary create method from annotator controller * goup results by class name in Annotator page * clean annotator controller code * clean annotator stimulus controller code * fix annotator page css class names * add empty state in annotator page * display annotator results counts * adding the scores of same class in annotator results * make ontologies filter work in annotator * make semantic types filter work in annotator * make prefrences filters work in annotator * make score_threshold and confidence_threshold filters work in annotator * add tooltip param to input field component * add tooltip param in select component * make fast context filter work * remove annotator old js file * fix annotator page hard coded colors * run annotator and annotatorplus with the same code * remove annotator plus old files * run ncbo annotator using the same code of annotator * remove ncbo annotator old files * put annotator page texts in local lang files * clean annotator js controller code * remove old annotator controller code * make advanced options open when it's not empty in annotator * add annotator bottom actions * remove duplicated icon rdf.svg * clean annotator stimulus controller * use dynamic apiKey in Annotator controller * extract url_to_endpoint method to application controller * make semantic groups filter work in Annotator * replace Cite Annotator and Recommender hard coded values * replace %a html tags with link_to tags in Annotator page * minimaze table component params * remove recognize partail words filter from annotator page * clean annotator controller code * pass NCBO_API_KEY in ncbo_annotator_plus * add a helping comment in annotator controller * make api params clear in annotator controller * Fix: Tests issues (#515) Fix tests issues * Fix: Auto fill ontology viw of input when we click the '+' button in summary page (#512) * auto fill ontology viw of input when coming form summary page * fix view of input in upload ontology and edit submission * Feature : internationalization part 15 - licenses, change_request, check_resolvability, errors and collection pages + change request, collections and check resolvability heplers (#491) * internationalization of licenses/form file * internationalization of change_request files * internationalization of errors files * internationalization of check_resolvability file * internationalization of collection file * internationalization of check resolvability helper * internationalization of change requests helper * internationalization of collections helper * Feature : internationalization part 16 - admin pages, footer appliance file (#493) * internationalization of admin files * internationalization of footer appliance file * Feature : internationalization part 17 - concepts and submissions pages (#495) * internationalization of concepts files * internationalization of show/concepts file * internationalization of submissions files * update of en.yml file * internationalization of submissions controller * update en.yml --------- Co-authored-by: Bilel KIHAL <[email protected]> * Feature : internationalization part 18 -Landscape, visits, properties, layout and ontologies files (#496) * internationalization of faire_score_landscape file * internationalization of notices file * internationalization of ontologies/views file * internationalization of properties/show file * internationalization of visits file * fix the bug of syntaxe in widget file * update the en.yml file * fix visits issue in home page internationalization --------- Co-authored-by: Bilel KIHAL <[email protected]> * Feature: Add an explicit search button to the search page (#504) * Auto search when we change advanced options in search page * add an explicite button in search page * remove advanced options id in search page * Fix: display of content sections in summary page by adding option to disable text truncate (#514) * add truncate option * remove duplicated code * update and use link? function --------- Co-authored-by: Bilel KIHAL <[email protected]> * Feature: make home page bubbles clickable (#513) * Feature : internationalization part 23 - Helpers: admin, agents, components, fair score, mappings, notes, ontologies, schemes and submission inputs (#503) * internationalization of admin helper * internationalization of agent helper * internationalization of fair score helper * internationalization of ontologies helper * internationalization of schemes helper * internationalization of notes helper * internationalization of mappings helper * internationalization of components helper * internationalization of submission inputs helper * update of en.yml file * remove not working translation in ontologies helper --------- Co-authored-by: Bilel KIHAL <[email protected]> Co-authored-by: Syphax bouazzouni <[email protected]> * Feature : internationalization part 19 - All components (#498) * internationalization of search input and file input component * internationalization of language selector component * internationalization of license field component * internationalization of browse card component * internationalization of ontology search component * internationalization of text area field component * internationalization of loader component * internationalization of progress pages component * internationalization of ontology subscribe button component * update the en.yml file --------- Co-authored-by: Bilel KIHAL <[email protected]> Co-authored-by: Syphax bouazzouni <[email protected]> * Feature : internationalization part 20 - Controllers: categories, groups, admin, agents, annotator, annotatorplus ,application, collections, concepts, home, label_xl, landscape + application helper (#500) * internationalization of categories controller * internationalization of groups controller * internationalization of agents controller * internationalization of annotator controller * internationalization of collections controller * internationalization of home controller * internationalization of admin controller * internationalization of application controller * internationalization of concepts controller * internationalization of landscape controller * internationalization of annotatorplus controller * internationalization of label_xl controller * update of en.yml file * internationalization of application helper --------- Co-authored-by: Bilel KIHAL <[email protected]> Co-authored-by: Syphax bouazzouni <[email protected]> * Feature : internationalization part 22 - Controllers: ontolobridge, ontologies metadata cruator, precache, projects, schemes, search, users and virtual appliance (#502) * internationalization of ontolobridge controller * internationalization of metadata cruator controller * internationalization of schemes controller * internationalization of search controller * internationalization of users controller * internationalization of projects controller * internationalization of precache controller * internationalization of virtual appliance controller * update of en.yml file --------- Co-authored-by: Bilel KIHAL <[email protected]> Co-authored-by: Syphax bouazzouni <[email protected]> * Feature : internationalization part 21 - Controllers: language, login, mappings, notes and ncbo annotator plus + MultiLanguages helper (#501) * internationalization of mappings controller * internationalization of notes controller * internationalization of login controller * internationalization of language controller * internationalization of ncbo annotator plus controller * update of en.yml file * internationalization of MultiLanguages helper * skip annotator page weird test * put back annotator page test * include translation helper in notes controller * create a class function for controllers translating * remove binding.pry in notes_controller.rb --------- Co-authored-by: Bilel KIHAL <[email protected]> Co-authored-by: Syphax bouazzouni <[email protected]> * Fix: internationalization of french part (#519) * update the fr.file * remove the duplicated keys in en.yml file * internationalization of ontologies helpers * fix the bug of missing translate error * Internationalization of remaining files * remove duplicated keys and update the en.yml file * remove duplicated keys and update the fr.yml file * fix typ in the internationalization of components.by * update bin/run_api to use the development branch ontoportal_docker --------- Co-authored-by: Syphax bouazzouni <[email protected]> * Feature: Update stageportal ui theme colors and extract svgs colors (#518) * update stageportal ui theme colors * add a loading animation to home twitter news * fix harded coded colors issues in the ui * fix selector component spacing issue * use error color css variable in the remaining hardcoded places * replace hard coded by dynamic colors in all icons --------- Co-authored-by: Syphax bouazzouni <[email protected]> * Fix: add target blank to summary page link to open in a new window (#531) * Feature: Add a "Ontoportal instances" section to point to the other portals (#524) * add the ontoportal_instances in all languages * add the logos of all portals * add the ontoportal section in home page * add PORTALS_LOGOS to config file * remove unused images * fix bug * add PORTALS_INSTANCES variable to the test config file --------- Co-authored-by: Syphax bouazzouni <[email protected]> * fix admin routes that don't work with namespace (#541) * Feature: improve search input component to add key events (#499) * make arrow up down and enter work in search input component * add search button for home and nav search --------- Co-authored-by: Syphax bouazzouni <[email protected]> * Fix: Harmonize API and UI urls in Search, Annotator and Recommender pages (#534) * create a stimulus controller to customize forms urls * harmonize search page api and ui urls * harmonize recommender api and ui urls * harmonize annotator api and ui urls * clean form url controller code * Feature: Update ontologies selector component (#508) * init ontologies selector design * ontologies selector options * display ontologies in ontologies selector * finalize ontologies selector design * put ontologies selector in the modal component * fix ontologies result display in ontologies selector * Make ontologies selector search bar work * show ontologies results count in ontologies selector * make groups filter work in ontologies selector * make filter by categories work in ontologies selector * add ontologies selector loading animation * make submission related filters work for ontologies selector * make select all work in ontologies selector * make retired ontologies and views filters work in ontologies selector * fix ontologies style in ontologies selector * add unselect all in ontologies selector * show tab selected checks count in ontologies selector * Clean ontologies selector js controller code * Add loading animation to ontologies selector * make ontology selection work in ontologies selector * add clear selection to ontologies selector * make ontologies selector component * remove duplicated cross icon in ontologies selector * clean ontologies controller code * use rails cache in ontologies selector * replace use cases of the old ontologies selector * delete old ontologies selector code * convert ontologies selector ui component into a helper * replace the usages of the ontologies selector ui component by the ontologies selector helper * replace 'selector' by 'ontologies_selector' in ontologies controller * add internationalisation to ontologies selector * remove the usage of static cache in ontologies selector * extract save and cancel buttons to a reusable helper in ontologies selector * undo extract save and cancel buttons to a reusable helper * add another type to the loader component that uses the style of the three dots * don't use display all in submissions fetching to make it faster in ontologies controller * remove ontology_picker_single code and replace its usages * give type argument in loader component a more significant value * replace ontologies selector text input by text input helper * replace ontologies selector chips components by chips components helpers * extract save and cancel buttons to helpers in the ontologies selector * fix ontologies selector name fild in search annotator and recommender page * fix text input helper label --------- Co-authored-by: Syphax bouazzouni <[email protected]> * Feature: Add contextual go to API icons in admin sections (#530) * create function to render rounded icon * use the function of rounded button into the admin sections * fix the color of rounded button icon * add api key to correct the urls * fix the style of json rouned button * rename render_rounded_button_with_style to rounded_button_component * Feature: Update ontologies selector component (#508) * init ontologies selector design * ontologies selector options * display ontologies in ontologies selector * finalize ontologies selector design * put ontologies selector in the modal component * fix ontologies result display in ontologies selector * Make ontologies selector search bar work * show ontologies results count in ontologies selector * make groups filter work in ontologies selector * make filter by categories work in ontologies selector * add ontologies selector loading animation * make submission related filters work for ontologies selector * make select all work in ontologies selector * make retired ontologies and views filters work in ontologies selector * fix ontologies style in ontologies selector * add unselect all in ontologies selector * show tab selected checks count in ontologies selector * Clean ontologies selector js controller code * Add loading animation to ontologies selector * make ontology selection work in ontologies selector * add clear selection to ontologies selector * make ontologies selector component * remove duplicated cross icon in ontologies selector * clean ontologies controller code * use rails cache in ontologies selector * replace use cases of the old ontologies selector * delete old ontologies selector code * convert ontologies selector ui component into a helper * replace the usages of the ontologies selector ui component by the ontologies selector helper * replace 'selector' by 'ontologies_selector' in ontologies controller * add internationalisation to ontologies selector * remove the usage of static cache in ontologies selector * extract save and cancel buttons to a reusable helper in ontologies selector * undo extract save and cancel buttons to a reusable helper * add another type to the loader component that uses the style of the three dots * don't use display all in submissions fetching to make it faster in ontologies controller * remove ontology_picker_single code and replace its usages * give type argument in loader component a more significant value * replace ontologies selector text input by text input helper * replace ontologies selector chips components by chips components helpers * extract save and cancel buttons to helpers in the ontologies selector * fix ontologies selector name fild in search annotator and recommender page * fix text input helper label --------- Co-authored-by: Syphax bouazzouni <[email protected]> * move the admin go to api button next to the action buttons --------- Co-authored-by: Syphax bouazzouni <[email protected]> Co-authored-by: Bilel Kihal <[email protected]> * Feature: Make the word "Ontology" configurable in all the portal (#520) * update the fr.file * remove the duplicated keys in en.yml file * internationalization of ontologies helpers * fix the bug of missing translate error * Internationalization of remaining files * remove duplicated keys and update the en.yml file * remove duplicated keys and update the fr.yml file * add the logic to replace ontology with semantic term * fix the bug of missing translation * fix the bug of missing translation * add the semantic term in it and de files * resolve the problem of translation terms * include ApplicationHelper into components.rb to use t(*args) function * add vocabulary, terminology and semantic_artefact terms in all languages * add Resource term to config file * add InternationalisationHelper * Remove the logic of configuring the ontology from the ApplicationHelper * include the InternationalisationHelper into the components.rb * fix the bug of syntax error * eliminate the use of the words ontology and semantic resource together * remove unused code * add documentation to the function * add resource term variable to bioportal config * add comment in all languages to explain how to use the resource term * handle the case of the $RESOURCE_TERM variable is not set --------- Co-authored-by: Syphax bouazzouni <[email protected]> * Feature: update metadata curator design and fix show all submissions (#551) * Feature: Update ontologies selector component (#508) * init ontologies selector design * ontologies selector options * display ontologies in ontologies selector * finalize ontologies selector design * put ontologies selector in the modal component * fix ontologies result display in ontologies selector * Make ontologies selector search bar work * show ontologies results count in ontologies selector * make groups filter work in ontologies selector * make filter by categories work in ontologies selector * add ontologies selector loading animation * make submission related filters work for ontologies selector * make select all work in ontologies selector * make retired ontologies and views filters work in ontologies selector * fix ontologies style in ontologies selector * add unselect all in ontologies selector * show tab selected checks count in ontologies selector * Clean ontologies selector js controller code * Add loading animation to ontologies selector * make ontology selection work in ontologies selector * add clear selection to ontologies selector * make ontologies selector component * remove duplicated cross icon in ontologies selector * clean ontologies controller code * use rails cache in ontologies selector * replace use cases of the old ontologies selector * delete old ontologies selector code * convert ontologies selector ui component into a helper * replace the usages of the ontologies selector ui component by the ontologies selector helper * replace 'selector' by 'ontologies_selector' in ontologies controller * add internationalisation to ontologies selector * remove the usage of static cache in ontologies selector * extract save and cancel buttons to a reusable helper in ontologies selector * undo extract save and cancel buttons to a reusable helper * add another type to the loader component that uses the style of the three dots * don't use display all in submissions fetching to make it faster in ontologies controller * remove ontology_picker_single code and replace its usages * give type argument in loader component a more significant value * replace ontologies selector text input by text input helper * replace ontologies selector chips components by chips components helpers * extract save and cancel buttons to helpers in the ontologies selector * fix ontologies selector name fild in search annotator and recommender page * fix text input helper label --------- Co-authored-by: Syphax bouazzouni <[email protected]> * fix metadata curator show all submissions options that was not working * disable metadata curator bulk edit button see if re-enable in futur * use table and button components in the curator page --------- Co-authored-by: Bilel Kihal <[email protected]> * Feature: Add view badge to the summary header section (#526) * Distinguish views on the summary page * fix image position issue in summary page * Fix: Ontoportal instances home section style issue (#552) * resolve a merge conflict in the check resolvability helper * fix ontoportal instances home section style * save the check_resolvability_message in the text variable --------- Co-authored-by: Syphax bouazzouni <[email protected]> * allow special chars in annotator's input text (#553) Co-authored-by: Syphax bouazzouni <[email protected]> * Fix: Some bugs in the pre-release 2.7.4 including internationalisation and code cleaning (#554) * remove old no more used controller * correct the casing of the imported stimulus controller * remove the internationalization of template string the search components * update internationilaztion helper to add the class method version * clean the include of internationalisation helper in some files * remove unused helper * remove the switch from the metadata curator * update the search input stimulus controller to add searchEndpoint value * clean some old usage to jquery chosen to prepare its total removal * fix project index edit button translation missing * handle the case of corrupted agents in the landscape * catch the missing translation in the overided internationalization * fix duplicated translations * complete missing translations and clean the en.yml file * complete and clean the fr.yml file * fix translation upcasing * fix internationlization not displayed well as sanitized * re-write the french translations * add edit submission french translations * Fix: pre release 2.4.7 global bugs (#556) * fix transparent home page icons * fix transparent icons in the browse page * fix summary page icons styles * Fix recommender style issues * Fix annotator style issues * Fix home fairness json link * fix edit ontology style issues * fix fair score link in summary page * fix summary page empty categories and subject * fix footer email icon link * fix summary page zoom icon * fix broken info tooltip component * display tooltip on truncated links in summary page * add tooltip to truncated groups in summary page * fix chip button icon color * fix mailing list subscription button in account page * fix browse page debug admin color issue * fix the count link in admin page for categories and groups tables * fix agent search autocomplete * fix home page recommender annotator section issue when we're in french * fix duplicated application key in the translation files * fix notes tab style * fix landscape page ontologies selector * use helpers.escape instead of CGI.escape in home_controller * don't display select collection when there is no collection * Fix O'faire summary details modal style * enforce the chips button to be inlined otherwise will break to new line * fix reverted translation after merging to development * rename fix_array_format helper show_ontology_domains --------- Co-authored-by: Syphax bouazzouni <[email protected]> * fix: running local docker api test CI * fix: login page icons size --------- Co-authored-by: Bilel Kihal <[email protected]> Co-authored-by: SirineMhedhbi <[email protected]> Co-authored-by: Bilel KIHAL <[email protected]>
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Done in this PR:
Auto fill ontology view of input when we click the '+' button in summary page, see the demo for a better understanding.
Demo
Capture.video.du.22-02-2024.17.59.02.webm