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@nlp4bia-bsc

NLP4BIA

Github of the Natural Language Processing for Biomedical Information Analysis at the Barcelona Supercomputing Center

Popular repositories Loading

  1. KeyCARE KeyCARE Public

    Jupyter Notebook 3

  2. hugging-face-pipeline hugging-face-pipeline Public

    Automation tools for different processes regarding the training and deployment of models and datasets to Hugging Face

    Python 2

  3. multicardioner_evaluation_library multicardioner_evaluation_library Public

    Evaluation library for the MultiCardioNER shared task (https://temu.bsc.es/multicardioner/)

    Python 2

  4. textmining-rocket-airflow textmining-rocket-airflow Public

    Python

  5. textmining-snomed-translator-dag textmining-snomed-translator-dag Public

    Python

  6. textmining-common-actions textmining-common-actions Public

    Shell

Repositories

Showing 10 of 18 repositories
  • dt4h-coverage-dash Public
    nlp4bia-bsc/dt4h-coverage-dash’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Dec 11, 2024
  • compare_brat_annotations Public

    This programme is designed to compare gold standard annotations in brat format with different predictions.

    nlp4bia-bsc/compare_brat_annotations’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Nov 8, 2024
  • dt4h-modelanotator-api Public
    nlp4bia-bsc/dt4h-modelanotator-api’s past year of commit activity
    Python 0 1 0 0 Updated Oct 30, 2024
  • annotate_brat_dictionary_lookup_snomed Public

    This repository contains a script to use a .tsv of SNOMED as dictionary lookup of these terms. There is an option of removal of certain 'semantic tags'. The input would be a folder with .txt files, and the output would be these .txt files and their corresponding brat annotations .anns files

    nlp4bia-bsc/annotate_brat_dictionary_lookup_snomed’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 25, 2024
  • scielo_webscrape_all_journals_info Public

    This repository contains a script to web scrape SciELO database in order to get a .csv file with information of: journal name, categories, active/inactive, URL

    nlp4bia-bsc/scielo_webscrape_all_journals_info’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Oct 25, 2024
  • KeyCARE Public
    nlp4bia-bsc/KeyCARE’s past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Oct 17, 2024
  • hugging-face-pipeline Public

    Automation tools for different processes regarding the training and deployment of models and datasets to Hugging Face

    nlp4bia-bsc/hugging-face-pipeline’s past year of commit activity
    Python 2 0 0 0 Updated Oct 17, 2024
  • textmining_scielo_scrapping Public
    nlp4bia-bsc/textmining_scielo_scrapping’s past year of commit activity
    Python 0 0 0 0 Updated Oct 4, 2024
  • dt4h-cogstack-pipelines Public
    nlp4bia-bsc/dt4h-cogstack-pipelines’s past year of commit activity
    0 0 0 0 Updated Oct 2, 2024
  • dt4h-modelannotation-spanish-api Public
    nlp4bia-bsc/dt4h-modelannotation-spanish-api’s past year of commit activity
    Python 0 0 0 0 Updated Sep 30, 2024
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