sync_externals

ngageoint · Jun 19, 2023 · 04090c4 · 04090c4
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diff --git a/externals/nitro/externals/coda-oss/.github/workflows/build_unittest.yml b/externals/nitro/externals/coda-oss/.github/workflows/build_unittest.yml
@@ -0,0 +1,126 @@
+name: build_unittest
+
+on: [push]
+
+jobs:
+  build-cmake-windows:
+    strategy:
+      matrix:
+        os: [windows-latest]
+        python-version: ['3.7']
+    name: ${{ matrix.os }}-${{ matrix.python-version }}-CMake
+    runs-on: ${{ matrix.os }}
+    steps:
+    - uses: actions/checkout@v3
+    - name: Set up Python
+      uses: actions/setup-python@v3
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: Install python dependencies
+      run: |
+        pip install numpy
+    - name: configure
+      run: |
+        ls env:
+        mkdir target-Release
+        cd target-Release
+        cmake .. -DCMAKE_INSTALL_PREFIX=install${{ matrix.os }}CMake-Github -DPYTHON_VERSION=${{ matrix.python-version }} -DENABLE_SWIG=ON
+        cd ..
+        mkdir target-Debug
+        cd target-Debug
+        cmake .. -DCMAKE_INSTALL_PREFIX=install${{ matrix.os }}CMake-Github -DENABLE_PYTHON=OFF
+    - name: build
+      run: |
+        cd target-Release
+        cmake --build . --config Release -j
+        cd ..
+        cd target-Debug
+        cmake --build . --config Debug -j
+    - name: install
+      run: |
+        cd target-Release
+        cmake --build . --config Release --target install
+        cd ..
+        cd target-Debug
+        cmake --build . --config Debug --target install
+    - name: test
+      run: |
+        cd target-Release
+        ctest -C Release --output-on-failure
+        cd ..
+        cd target-Debug
+        ctest -C Debug --output-on-failure
+
+  build-linux-cmake:
+    strategy:
+      matrix:
+        os: [ubuntu-latest]
+        python-version: ['3.7']
+    name: ${{ matrix.os }}-${{ matrix.python-version }}-CMake
+    runs-on: ${{ matrix.os }}
+    steps:
+    - uses: actions/checkout@v3
+    - name: Set up Python
+      uses: actions/setup-python@v3
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: Install python dependencies
+      run: |
+        pip install numpy
+    - name: configure
+      run: |
+        env
+        which python
+        mkdir target
+        cd target
+        cmake .. -DCMAKE_INSTALL_PREFIX=install${{ matrix.os }}CMake-Github -DPYTHON_VERSION=${{ matrix.python-version }} -DENABLE_SWIG=ON
+    - name: build
+      run: |
+        cd target
+        # "-j" spawns too many processes causing GCC to crash
+        cmake --build . -j 12
+    - name: install
+      run: |
+        cd target
+        cmake --build . --target install
+    - name: test
+      run: |
+        cd target
+        ctest --output-on-failure
+
+  build-waf:
+    strategy:
+      matrix:
+        os: [ubuntu-latest, windows-2019]
+        python-version: ['3.7']
+        debugging: ['--enable-debugging', '']
+    name: ${{ matrix.os }}-${{ matrix.python-version }}-waf
+    runs-on: ${{ matrix.os }}
+    steps:
+    - uses: actions/checkout@v3
+    - name: Set up Python
+      uses: actions/setup-python@v3
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: configure_with_swig
+      if: ${{ matrix.os == 'ubuntu-latest' }}
+      run: |
+        pip install numpy
+        mkdir install${{ matrix.os }}Waf-Github
+        python waf configure --prefix="$PWD/install${{ matrix.os }}Waf-Github" --enable-swig ${{ matrix.debugging }}
+    - name: configure_without_swig
+      if: ${{ matrix.os == 'windows-2019' }}
+      run: |
+        pip install numpy
+        mkdir install${{ matrix.os }}Waf-Github
+        python waf configure --prefix="$PWD/install${{ matrix.os }}Waf-Github" ${{ matrix.debugging }}
+    - name: build
+      run: |
+        python waf build
+    - name: install
+      run: |
+        python waf install
+    - name: test
+      run: |
+        python waf install --alltests
+
diff --git a/externals/nitro/externals/coda-oss/ReleaseNotes.md b/externals/nitro/externals/coda-oss/ReleaseNotes.md
@@ -0,0 +1,85 @@
+```
+     _________________________
+    |   ____  _||_  ___  __   |
+    |  /___ \/_||_\| __\/  \  |
+    | //   \// || \||  \\ _ \ |
+    | ||   [===||===]  ||(_)| |
+    | ||   _|| || |||  ||__ | |
+    | \\ _/ |\_||_/||__/|| || |
+    |  \___/ \_||_/|___/|| || |
+    |__________||_____________|
+ ```
+# coda-oss Release Notes
+
+## [Release 2023-06-05](https://github.com/mdaus/coda-oss/releases/tag/2023-06-05)
+* *zlib* updated to [1.2.13](https://github.com/madler/zlib/releases/tag/v1.2.13).
+* new `mem::ComplexView` class to make it easier to process complex data stored in parallel. 
+* adjust compiler flags for clean *CMake* builds.
+* wrap common "file open" routines (e.g., `fopen()`) to support `sys::expandEnvironmentVariables()`.
+* add header-only [HighFive](https://github.com/BlueBrain/HighFive) HDF5-wrapper library.
+* Added a handful of [HighFive](https://github.com/BlueBrain/HighFive) utility routines.
+* `mt::transform_async()` removed, it doesn't match C++17 techniques.'
+* Revamp `sys::byteSwap()` for improved type-safety and
+  [better performance](https://devblogs.microsoft.com/cppblog/a-tour-of-4-msvc-backend-improvements/).
+ * Added case-insensitive string comparison utilties: `str::eq()` and `str::ne()`;
+   `xml::lite::Uri`s compare case-insensitive.
+
+## [Release 2022-12-14](https://github.com/mdaus/coda-oss/releases/tag/2022-12-14)
+* removed remaining vestiges of `std::auto_ptr`, provide `mem::AutoPtr` for the tiny handful of
+  places (e.g., SWIG bindings) that still need copying.
+* `xml::lite::Element` overloads to make creting new XML documents easier; see unittests for examples.
+* try even harder to find unittest files in various scenarios.
+* build *hdf5.lite* with **waf**.
+* New `--optz=fastest-possible` (**waf** only) which adds
+  [`-march=native`](https://gcc.gnu.org/onlinedocs/gcc-12.2.0/gcc/x86-Options.html#x86-Options)
+  to *fastest* for **waf** builds.  There is a new *faster* option (the default) which is currently
+  the same as *fastest* (i.e., no `-march=native`).
+
+## [Release 2022-11-04](https://github.com/mdaus/coda-oss/releases/tag/2022-11-04)
+* "Cut" from [main](https://github.com/mdaus/coda-oss/tree/main), not *master*.
+* The [HDFGroup](https://hdfgroup.org/)s [HDF5 library](https://github.com/HDFGroup/hdf5) is built
+   and installed; a simple (and very incomplete!) wrapper is provided, this is at the "hello world!" stage.
+* A few **cli** routines have been tweaked to make unit-testing easier.
+* Utilitiy routines for finding various files when unit-testing.
+* Removed C++14 work-arounds needed in C++11. Legacy C++ exception specificatons removed.
+* Rebuild `waf` for FIPS error; added more debug options.
+
+## [Release 2022-08-30](https://github.com/mdaus/coda-oss/releases/tag/2022-08-30)
+* XML is now always written as UTF-8; the code will still try to read Windows-1252.
+* `Uri`s are no longer validated by default.
+* Minor tweaks from other projects.
+* ~~Final C++11 release 🤞🏻; future releases will be C++14 from [main](https://github.com/mdaus/coda-oss/tree/main).~~
+
+## [Release 2022-08-02](https://github.com/mdaus/coda-oss/releases/tag/2022-08-02)
+* remove *Expat* and *libXML* modules and support in **xml.lite**; only *Xerces* was actively used.
+* ~~fix `waf` to work-around FIPS warning because of insecure *md5* hashing.~~
+* tweak `str::EncodedStringView` and `str::EncodedString` for
+  [future XML changes](https://github.com/mdaus/coda-oss/tree/feature/always-write-xml-as-utf8).
+
+## [Release 2022-06-29](https://github.com/mdaus/coda-oss/releases/tag/2022-06-29)
+* remove **modules/drivers/boost** as it was empty (and unused);
+  **modules/c++/serialize** depended on boost, so it has also been removed.
+* Update to [zlib 1.2.12](https://www.zlib.net/zlib-1.2.12.tar.gz),
+  ["Due to the bug fixes, any installations of 1.2.11 should be replaced with 1.2.12."](https://www.zlib.net/)
+* Build most code in Visual Studio 2022
+* Removed more compiler warnings
+* Begin work on `CODA_OSS_API` (needed for building a shared-library/DLL)
+* Add `run1D()` method to `mt::GenerationThreadPool` 
+
+## [Release 2022-05-03](https://github.com/mdaus/coda-oss/releases/tag/2022-05-03)
+* Fixed a bug in `Poly2D::atY()`; improved `flipXY()` behavior.
+* Implement [std::filesystem::file_size()](https://en.cppreference.com/w/cpp/filesystem/file_size).
+* use `inline` functions for `TEST_` macros
+* force use of [64-bit `time_t`](https://en.wikipedia.org/wiki/Year_2038_problem)
+* more routines now support a `std::span` overload; e.g., `io::InputStream::read()`.
+
+## [Release 2022-02-22](https://github.com/mdaus/coda-oss/releases/tag/2022-02-22)
+* new `EnocdedString` and `EncodedStringView` to manage strings in different encodings
+* XML containing UTF-8 characters can now be validated
+* Update to [GSL 4.0.0](https://github.com/microsoft/GSL/releases/tag/v4.0.0)
+* our implementation of `std` stuff is all in the `coda_oss` namespace
+* old, unused **log4j.jar** deleted to remove any questions about the security vulnerability
+
+## [Release 2021-12-13](https://github.com/mdaus/coda-oss/releases/tag/2021-12-13)
+* Try hard to parse XML encoded in various ways
+* Simplify XML element creation for common idioms