Update model source in config #98
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| # Pushes to production | |
| # \__#1 deploy w/ SCHEMATIC_PIN --> NF_data_curator (prod) | |
| # | |
| # Pushes to staging | |
| # \__#2 deploy w/ SCHEMATIC_PIN --> NF_data_curator-staging | |
| # Staging deploys are for staging of regular releases of data model | |
| # | |
| # Pushes to edge | |
| # \__#3 deploy w/ schematic `develop` on GH --> NF_data_curator-edge | |
| # Edge deploys for testing schematic development branch or simply the *next* version of schematic | |
| name: custom-shiny-deploy | |
| on: | |
| push: | |
| branches: | |
| - production | |
| - staging | |
| - edge-* | |
| paths-ignore: | |
| - '.github/ISSUE_TEMPLATE/**' | |
| - '**/*.md' | |
| - '**/.gitignore' | |
| env: | |
| # PIN=known stable and tested version of schematic used with prod and staging DCA | |
| SCHEMATIC_PIN: 23.6.3 | |
| SCHEMATIC_NEXT: 24.1.1 | |
| jobs: | |
| shiny-deploy: | |
| runs-on: ubuntu-latest | |
| # This image seems to be based on rocker/r-ver which in turn is based on debian | |
| container: rocker/rstudio:4.3 | |
| env: | |
| # This should not be necessary for installing from public repo's however remotes::install_github() fails without it. | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| # https://docs.posit.co/connect/admin/r/dependencies/ | |
| - name: Install System Dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y tcl tk tk-dev tk-table default-jdk cmake git libpng-dev libjpeg-dev make imagemagick libmagick++-dev gsfonts libssl-dev libfreetype6-dev libfribidi-dev libharfbuzz-dev libfontconfig1-dev libsodium-dev libglu1-mesa-dev libgl1-mesa-dev zlib1g-dev libcairo2-dev libssh2-1-dev libudunits2-dev unixodbc-dev libxml2-dev libmysqlclient-dev libcurl4-openssl-dev libtiff-dev libicu-dev libgdal-dev gdal-bin libgeos-dev libproj-dev libsqlite3-dev python3 libnode-dev libglpk-dev | |
| - uses: actions/checkout@v4 | |
| - name: Authorize and deploy app | |
| shell: Rscript {0} | |
| run: | | |
| install.packages(c("rsconnect", "shiny")) | |
| # if there is a tag, 'refName' will be tag name | |
| repo <- Sys.getenv("GITHUB_REPOSITORY") | |
| appName <- strsplit(repo, "/")[[1]][2] | |
| refName <- Sys.getenv("GITHUB_REF_NAME") | |
| if (refName == "production" || grepl("v[0-9]+.[0-9]+.[0-9]+", refName)) { | |
| message("Deploying production instance: ", appName) | |
| } else if (refName == "staging") { | |
| appName <- paste(appName, "staging", sep = "-") | |
| message("Deploying staging instance: ", appName) | |
| } else { | |
| appName <- paste(appName, "edge", sep = "-") | |
| message("Deploying edge instance: ", appName) | |
| } | |
| rsConnectUser <- "${{ secrets.RSCONNECT_USER }}" | |
| rsConnectToken <- "${{ secrets.RSCONNECT_TOKEN }}" | |
| rsConnectSecret <- "${{ secrets.RSCONNECT_SECRET }}" | |
| # create config file | |
| config <- "CLIENT_ID: ${{ secrets.OAUTH_CLIENT_ID }}" | |
| config <- c(config, "CLIENT_SECRET: ${{ secrets.OAUTH_CLIENT_SECRET }}") | |
| appUrl <- sprintf("https://%s.shinyapps.io/%s", rsConnectUser, appName) | |
| config <- c(config, sprintf("APP_URL: %s", appUrl)) | |
| configFileConn <- file("oauth_config.yml") | |
| tryCatch( | |
| writeLines(config, configFileConn), | |
| finally=close(configFileConn) | |
| ) | |
| rsconnect::setAccountInfo(rsConnectUser, rsConnectToken, rsConnectSecret) | |
| rsconnect::deployApp(appName = appName, appFiles = c("global.R", "ui.R", "server.R"), forceUpdate = TRUE) |