Code

Improve process label linting#2227

Code

Merged

awgymer merged 10 commits intonf-core:devnf-core/tools:devfrom awgymer:fix-lint-process-labelawgymer/nf-core-tools:fix-lint-process-labelCopy head branch name to clipboardApr 26, 2023

+165-20

Commits

Commits on Mar 29, 2023

• Lint all labels and check for conflicting or non-standard

  awgymer

  committed
  46fcedf

  Copy full SHA for 46fcedf

Commits on Apr 4, 2023

• Add checks for duplicated labels and warn if non-standard labels found

  awgymer

  committed
  7849dcc

  Copy full SHA for 7849dcc

• Fix indentation so that warning logic is outside loop and not repeated for every label

  awgymer

  committed
  2915f2e

  Copy full SHA for 2915f2e

• Add handling and warning for labels that do not match the expected regex

  awgymer

  committed
  c57dbf3

  Copy full SHA for c57dbf3

• Merge branch 'dev' into fix-lint-process-label

  awgymer

  authored
  556e100

  Copy full SHA for 556e100

Commits on Apr 25, 2023

• Merge branch 'dev' into fix-lint-process-label

  awgymer

  authored
  38b5603

  Copy full SHA for 38b5603

• Merge branch 'dev' into fix-lint-process-label

  awgymer

  authored
  c5b3e4d

  Copy full SHA for c5b3e4d

• Move label linting code to its own method and add test for that method only

  awgymer

  committed
  ee0b95b

  Copy full SHA for ee0b95b

Commits on Apr 26, 2023

• Fix test cases and ensure test is run. Make sure label linting method is called

  awgymer

  committed
  d593f86

  Copy full SHA for d593f86

• Merge branch 'dev' into fix-lint-process-label

  awgymer

  authored
  18b6d1a

  Copy full SHA for 18b6d1a