Use explicit requirements.txt file

nf-core · Aug 31, 2023 · a64e540 · a64e540
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/.github/workflows/pytest-workflow.yml b/.github/workflows/pytest-workflow.yml
@@ -103,12 +103,10 @@ jobs:
         with:
           path: ~/.cache/pip
           key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt') }}
-          restore-keys: |
-            ${{ runner.os }}-pip-${{ github.event.repository.name }}
 
       - name: Install Python dependencies
         if: steps.python-cache-setup.outputs.cache-hit != 'true'
-        run: python -m pip install --upgrade pip pytest-workflow cryptography
+        run: python -m pip install --upgrade -r tests/requirements.txt
 
       - name: Install Nextflow ${{ matrix.NXF_VER }}
         uses: nf-core/setup-nextflow@v1

diff --git a/tests/requirements.txt b/tests/requirements.txt
@@ -0,0 +1,3 @@
+pip
+pytest-workflow 
+cryptography