fix: cf_ploidy type

nf-core · May 27, 2021 · 8951221 · 8951221
1 parent 29dae29
commit 8951221
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/nextflow.config b/nextflow.config
@@ -52,7 +52,7 @@ params {
   cf_coeff = 0.05                    // default value for Control-FREEC
   cf_contamination = null            // by default not specified in Control-FREEC
   cf_contamination_adjustment = null // by default we are not using this in Control-FREEC
-  cf_ploidy = "2"                    // you can use 2,3,4
+  cf_ploidy = 2                      // you can use 2,3,4
   cf_window = null                   // by default we are not using this in Control-FREEC
   generate_gvcf = null // g.vcf are not produced by HaplotypeCaller by default
   no_strelka_bp = null // Strelka will use Manta candidateSmallIndels if available