Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Refactor checkm2/databasedownload using aria2 #6654

Merged
merged 11 commits into from
Sep 25, 2024
Merged

Refactor checkm2/databasedownload using aria2 #6654

merged 11 commits into from
Sep 25, 2024

Commits on Sep 17, 2024

  1. Use aria2 for CHECKM2_DATABASEDOWNLOAD, update snaps

    @dialvarezs
    dialvarezs committed Sep 17, 2024
    Configuration menu
    Copy the full SHA
    bcd02fe View commit details
    Browse the repository at this point in the history

  2. Fix linting

    @dialvarezs
    dialvarezs committed Sep 17, 2024
    Configuration menu
    Copy the full SHA
    27ec583 View commit details
    Browse the repository at this point in the history

  3. Add bioconda to environment.yml

    @dialvarezs
    dialvarezs committed Sep 17, 2024
    Configuration menu
    Copy the full SHA
    9adc31e View commit details
    Browse the repository at this point in the history

  4. Add zenodo_id as input to select which version to download

    @dialvarezs
    dialvarezs committed Sep 17, 2024
    Configuration menu
    Copy the full SHA
    5be74bd View commit details
    Browse the repository at this point in the history

  5. Add input param to the test

    @dialvarezs
    dialvarezs committed Sep 17, 2024
    Configuration menu
    Copy the full SHA
    c58a534 View commit details
    Browse the repository at this point in the history

  6. Add process input for predict

    @dialvarezs
    dialvarezs committed Sep 17, 2024
    Configuration menu
    Copy the full SHA
    6796328 View commit details
    Browse the repository at this point in the history

Commits on Sep 19, 2024

  1. Merge branch 'master' into dev-checkm2

    @jfy133
    jfy133 authored Sep 19, 2024
    Configuration menu
    Copy the full SHA
    50f66b4 View commit details
    Browse the repository at this point in the history

Commits on Sep 24, 2024

  1. Merge branch 'master' into dev-checkm2

    @dialvarezs
    dialvarezs authored Sep 24, 2024
    Configuration menu
    Copy the full SHA
    29a6362 View commit details
    Browse the repository at this point in the history

  2. Fix databasedownload meta

    @dialvarezs
    dialvarezs authored Sep 24, 2024
    Configuration menu
    Copy the full SHA
    32d8cc1 View commit details
    Browse the repository at this point in the history

Commits on Sep 25, 2024

  1. Improve field description

    @dialvarezs
    dialvarezs committed Sep 25, 2024
    Configuration menu
    Copy the full SHA
    f239ff0 View commit details
    Browse the repository at this point in the history

  2. Merge branch 'master' into dev-checkm2

    @jfy133
    jfy133 authored Sep 25, 2024
    Configuration menu
    Copy the full SHA
    e11e177 View commit details
    Browse the repository at this point in the history