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stubs and test for rnaseq modules - part I #11569

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stubs and test for rnaseq modules - part I

stubs and test for rnaseq modules - part I #11569

Run time

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Job Run time
pre-commit
13s
prettier
54s
nf-test-changes
42s
editorconfig
12s
pytest-changes
10s
pytest
0s
nf-core-lint-modules (preprocess_rnaseq)
44s
nf-core-lint-modules (fastq_subsample_fq_salmon)
44s
nf-core-lint-modules (fastq_align_hisat2)
1m 7s
nf-core-lint-modules (fq/subsample)
1m 18s
nf-core-lint-modules (preseq/lcextrap)
1m 35s
nf-core-lint-modules (hisat2/extractsplicesites)
1m 19s
nf-core-lint-modules (bbmap/bbsplit)
1m 32s
nf-core-lint-modules (hisat2/align)
1m 24s
nf-core-lint-modules (custom/catadditionalfasta)
1m 20s
nf-core-lint-modules (hisat2/build)
1m 21s
nf-test (modules/nf-core/fq/subsample, conda)
7m 14s
nf-test (modules/nf-core/fq/subsample, docker_self_hosted)
3m 56s
nf-test (modules/nf-core/fq/subsample, singularity)
4m 9s
nf-test (modules/nf-core/preseq/lcextrap, conda)
6m 27s
nf-test (modules/nf-core/preseq/lcextrap, docker_self_hosted)
4m 17s
nf-test (modules/nf-core/preseq/lcextrap, singularity)
3m 51s
nf-test (modules/nf-core/hisat2/extractsplicesites, conda)
4m 23s
nf-test (modules/nf-core/hisat2/extractsplicesites, docker_self_hosted)
3m 43s
nf-test (modules/nf-core/hisat2/extractsplicesites, singularity)
3m 54s
nf-test (subworkflows/nf-core/preprocess_rnaseq, conda)
12m 11s
nf-test (subworkflows/nf-core/preprocess_rnaseq, docker_self_hosted)
5m 14s
nf-test (subworkflows/nf-core/preprocess_rnaseq, singularity)
6m 12s
nf-test (modules/nf-core/bbmap/bbsplit, conda)
6m 44s
nf-test (modules/nf-core/bbmap/bbsplit, docker_self_hosted)
4m 14s
nf-test (modules/nf-core/bbmap/bbsplit, singularity)
7m 30s
nf-test (subworkflows/nf-core/fastq_subsample_fq_salmon, conda)
5m 37s
nf-test (subworkflows/nf-core/fastq_subsample_fq_salmon, docker_self_hosted)
4m 4s
nf-test (subworkflows/nf-core/fastq_subsample_fq_salmon, singularity)
4m 11s
nf-test (subworkflows/nf-core/fastq_align_hisat2, conda)
14m 38s
nf-test (subworkflows/nf-core/fastq_align_hisat2, docker_self_hosted)
4m 44s
nf-test (subworkflows/nf-core/fastq_align_hisat2, singularity)
4m 12s
nf-test (modules/nf-core/hisat2/align, conda)
17m 39s
nf-test (modules/nf-core/hisat2/align, docker_self_hosted)
5m 51s
nf-test (modules/nf-core/hisat2/align, singularity)
8m 30s
nf-test (modules/nf-core/custom/catadditionalfasta, conda)
3m 47s
nf-test (modules/nf-core/custom/catadditionalfasta, docker_self_hosted)
2m 57s
nf-test (modules/nf-core/custom/catadditionalfasta, singularity)
3m 6s
nf-test (modules/nf-core/hisat2/build, conda)
6m 37s
nf-test (modules/nf-core/hisat2/build, docker_self_hosted)
4m 0s
nf-test (modules/nf-core/hisat2/build, singularity)
5m 3s
confirm-pass
1s
3h 13m 31s