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Move long read preprocessing into a subworkflow #674

Merged

jfy133 merged 37 commits into nf-core:dev from muabnezor:move_lr_qc

Oct 11, 2024

assets/multiqc_config.yml

-Original file line number
+Diff line change
@@ Expand Up / @@ -112,6 +112,9 @@ sp: @@
         fn_re: ".*[kraken2|centrifuge].*report.txt"
       quast:
         fn_re: "report.*.tsv"
+      filtlong:
+        num_lines: 20
+        fn_re: ".*_filtlong.log"
     ## File name cleaning
     extra_fn_clean_exts:
@@ Expand Down @@