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Merging template updates 2.0.1 #218

Merged
merged 14 commits into from
Jul 26, 2021
Merged

Merging template updates 2.0.1 #218

merged 14 commits into from
Jul 26, 2021

Commits on Jul 13, 2021

  1. Template update for nf-core/tools version 2.0

    @KevinMenden
    KevinMenden committed Jul 13, 2021
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  2. Template update for nf-core/tools version 2.0.1

    @nf-core-bot
    nf-core-bot committed Jul 13, 2021
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Commits on Jul 20, 2021

  1. Publish genes predicted with Prodigal in BUSCO process

    @skrakau
    skrakau committed Jul 20, 2021
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  2. Mention prodigal output in docs

    @skrakau
    skrakau committed Jul 20, 2021
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  3. Update CHANGELOG

    @skrakau
    skrakau committed Jul 20, 2021
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Commits on Jul 23, 2021

  1. Merge template updates 2.0.1

    @skrakau
    skrakau committed Jul 23, 2021
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  2. Update fastp module

    @skrakau
    skrakau committed Jul 23, 2021
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  3. Update fastqc module

    @skrakau
    skrakau committed Jul 23, 2021
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Commits on Jul 24, 2021

  1. Adjust and fix usage of publish_by_meta for local modules

    @skrakau
    skrakau committed Jul 24, 2021
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  2. Adjust description of output paths in output.md

    @skrakau
    skrakau committed Jul 24, 2021
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  3. Fix unordered list, blank lines and white spaces for linting

    @skrakau
    skrakau committed Jul 24, 2021
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  4. Ignore final newlines for JSON files

    @skrakau
    skrakau committed Jul 24, 2021
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  5. Update CHANGELOG

    @skrakau
    skrakau committed Jul 24, 2021
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Commits on Jul 26, 2021

  1. Rm duplicates from nextflow.config and delete conf/docker.config

    @skrakau
    skrakau committed Jul 26, 2021
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