Rm duplicates from nextflow.config and delete conf/docker.config

nf-core · Jul 26, 2021 · 3c4148c · 3c4148c
1 parent 07482be
commit 3c4148c
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diff --git a/conf/docker.config b/conf/docker.config
diff --git a/nextflow.config b/nextflow.config
@@ -102,30 +102,6 @@ params {
     enable_conda               = false
     singularity_pull_docker_container = false
 
-    // References
-    igenomes_base              = 's3://ngi-igenomes/igenomes'
-    igenomes_ignore            = false
-
-    // MultiQC options
-    multiqc_config             = null
-    multiqc_title              = null
-    max_multiqc_email_size     = '25.MB'
-
-    // Boilerplate options
-    outdir                     = './results'
-    tracedir                   = "${params.outdir}/pipeline_info"
-    publish_dir_mode           = 'copy'
-    email                      = null
-    email_on_fail              = null
-    plaintext_email            = false
-    monochrome_logs            = false
-    help                       = false
-    validate_params            = true
-    show_hidden_params         = false
-    schema_ignore_params       = 'genomes,modules'
-    enable_conda               = false
-    singularity_pull_docker_container = false
-
     // Config options
     custom_config_version      = 'master'
     custom_config_base         = "https://raw.githubusercontent.com/nf-core/configs/${params.custom_config_version}"