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Incerease resources to DIAMOND_BLASTX process
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LilyAnderssonLee committed Nov 23, 2023
1 parent 3a51812 commit ead6526
Showing 1 changed file with 9 additions and 3 deletions.
12 changes: 9 additions & 3 deletions conf/pipeline/taxprofiler/hasta.config
Original file line number Diff line number Diff line change
Expand Up @@ -8,14 +8,20 @@ params {
process {

withName:'BBMAP_BBDUK' {
memory = { check_max( 80.GB * task.attempt, 'memory' ) }
memory = { check_max( 72.GB * task.attempt, 'memory' ) }
}

withName: 'MALT_RUN' {
memory = { check_max( 80.GB * task.attempt, 'memory' ) }
memory = { check_max( 72.GB * task.attempt, 'memory' ) }
}

withName: 'MEGAN_RMA2INFO_TSV' {
memory = { check_max( 80.GB * task.attempt, 'memory' ) }
memory = { check_max( 72.GB * task.attempt, 'memory' ) }
}

withName 'DIAMOND_BLASTX' {
cpus = { check_max( 36 * task.attempt, 'cpus' ) }
memory = { check_max( 72.GB * task.attempt, 'memory' ) }
time = { check_max( 72.h * task.attempt, 'time' ) }
}
}

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