Merge pull request #615 from LilyAnderssonLee/taxprofiler_config

Increase resources for KAIJU_KAIJU2TABLE
nf-core · Jan 19, 2024 · e8e642a · e8e642a
2 parents 07d20fe + 54bb949
commit e8e642a
Showing 1 changed file with 7 additions and 1 deletion.
diff --git a/conf/pipeline/taxprofiler/hasta.config b/conf/pipeline/taxprofiler/hasta.config
@@ -14,7 +14,7 @@ process {
     withName: 'MALT_RUN' {
         memory = { check_max( 72.GB   * task.attempt, 'memory' ) }
     }
-    
+
     withName: 'MEGAN_RMA2INFO_TSV' {
         memory = { check_max( 72.GB   * task.attempt, 'memory' ) }
     }
@@ -24,4 +24,10 @@ process {
         memory = { check_max( 72.GB   * task.attempt, 'memory' ) }
         time   = { check_max( 72.h    * task.attempt, 'time'   ) }
     }
+
+    withName: 'KAIJU_KAIJU2TABLE' {
+        cpus   = { check_max( 6      * task.attempt, 'cpus'   ) }
+        memory = { check_max( 36.GB  * task.attempt, 'memory' ) }
+        time   = { check_max( 8.h    * task.attempt, 'time'   ) }
+    }
 }