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Update self_hosted_runner: remove deprecated docker.userEmulation and use containerOptions #2423

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Update self_hosted_runner: remove deprecated docker.userEmulation and use containerOptions

Update self_hosted_runner: remove deprecated docker.userEmulation and use containerOptions #2423

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Job Run time
Check if nextflow config runs in repository root
13s
Check if all profiles are tested
3s
Run abims profile
12s
Run adcra profile
12s
Run alice profile
12s
Run apollo profile
14s
Run arcc profile
18s
Run aws_tower profile
15s
Run awsbatch profile
16s
Run azurebatch profile
15s
Run bi profile
14s
Run bigpurple profile
11s
Run binac profile
4m 43s
Run biohpc_gen profile
13s
Run biowulf profile
11s
Run cambridge profile
14s
Run cbe profile
15s
Run ccga_dx profile
14s
Run ccga_med profile
14s
Run cedars profile
13s
Run ceres profile
13s
Run cfc profile
13s
Run cfc_dev profile
18s
Run cheaha profile
16s
Run computerome profile
17s
Run create profile
13s
Run crg profile
13s
Run crick profile
13s
Run crukmi profile
18s
Run csiro_petrichor profile
16s
Run daisybio profile
16s
Run denbi_qbic profile
4m 43s
Run dkfz profile
14s
Run ebc profile
14s
Run ebi_codon profile
11s
Run ebi_codon_slurm profile
13s
Run eddie profile
13s
Run engaging profile
14s
Run einstein profile
16s
Run ethz_euler profile
16s
Run eva profile
15s
Run fgcz profile
14s
Run fub_curta profile
12s
Run genotoul profile
14s
Run genouest profile
16s
Run gis profile
11s
Run google profile
15s
Run googlebatch profile
19s
Run googlels profile
15s
Run hasta profile
16s
Run hki profile
13s
Run hypatia profile
11s
Run icr_davros profile
14s
Run ifb_core profile
20s
Run imb profile
12s
Run ilifu profile
14s
Run imperial profile
12s
Run incliva profile
17s
Run ipop_up profile
14s
Run janelia profile
14s
Run jax profile
13s
Run jex profile
18s
Run ku_sund_dangpu profile
18s
Run leicester profile
13s
Run lugh profile
12s
Run m3c profile
12s
Run maestro profile
13s
Run mana profile
13s
Run marjorie profile
14s
Run marvin profile
17s
Run mccleary profile
17s
Run medair profile
17s
Run mjolnir_globe profile
17s
Run mpcdf profile
15s
Run munin profile
13s
Run nci_gadi profile
12s
Run nu_genomics profile
17s
Run nygc profile
12s
Run nyu_hpc profile
14s
Run oist profile
17s
Run pasteur profile
19s
Run pawsey_nimbus profile
14s
Run pawsey_setonix profile
13s
Run pdc_kth profile
13s
Run phoenix profile
14s
Run psmn profile
14s
Run qmul_apocrita profile
12s
Run rosalind profile
13s
Run rosalind_uge profile
14s
Run sage profile
15s
Run sahmri profile
18s
Run sanger profile
12s
Run scw profile
10s
Run seawulf profile
12s
Run self_hosted_runner profile
13s
Run seg_globe profile
13s
Run software_license profile
15s
Run tigem profile
15s
Run tubingen_apg profile
18s
Run tufts profile
16s
Run tuos_stanage profile
21s
Run ucl_cscluster profile
15s
Run ucl_myriad profile
15s
Run uct_hpc profile
16s
Run ucd_sonic profile
15s
Run uge profile
15s
Run unibe_ibu profile
12s
Run unc_lccc profile
13s
Run unc_longleaf profile
14s
Run uod_hpc profile
15s
Run uppmax profile
15s
Run utd_europa profile
15s
Run utd_ganymede profile
13s
Run utd_sysbio profile
12s
Run uw_hyak_pedslabs profile
14s
Run uzh profile
14s
Run uzl_omics profile
14s
Run vai profile
14s
Run vsc_calcua profile
13s
Run vsc_kul_uhasselt profile
13s
Run vsc_ugent profile
16s
Run wehi profile
12s
Run wustl_htcf profile
19s
Run xanadu profile
13s
Run york_viking profile
13s
38m 38s